RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SALL1Q9NSC2 1324 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 IL1R1P14778 569 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 SOX11P35716 441 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 LAMC2Q13753 1193 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 CYTH1Q15438 398 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 DNAL1Q4LDG9 190 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 YY1AP1Q9H869 796 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 NUP93Q8N1F7 819 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 KRT35Q92764 455 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 SLC40A1Q9NP59 571 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 IL10P22301 178 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 PRPF39Q86UA1 669 aaKnown RBP16.7■□□□□ 0.26
PTPN11-201ENST00000351677 TMBIM4Q9HC24 238 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 ARHGEF28Q8N1W1 1705 aaKnown RBP16.7■□□□□ 0.26
PTPN11-201ENST00000351677 MUTP22033 750 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 ETFBP38117 255 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 ACOT1Q86TX2 421 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 EFHBQ8N7U6 833 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 FBXO25Q8TCJ0 367 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 TFB1MQ8WVM0 346 aaKnown RBP16.7■□□□□ 0.26
PTPN11-201ENST00000351677 FAM111AQ96PZ2 611 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 GRID1Q9ULK0 1009 aa16.7■□□□□ 0.26
PTPN11-201ENST00000351677 TMCC1O94876 653 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 TCN1P20061 433 aaPredicted RBP16.69■□□□□ 0.26
PTPN11-201ENST00000351677 ELMSAN1Q6PJG2 1045 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 DUSP9Q99956 384 aaKnown RBP16.69■□□□□ 0.26
PTPN11-201ENST00000351677 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 DGKIO75912 1065 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 SYF2O95926 243 aaKnown RBP16.69■□□□□ 0.26
PTPN11-201ENST00000351677 SERPINB4P48594 390 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 CYP24A1Q07973 514 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 GPATCH2LQ9NWQ4 482 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 SLC39A10Q9ULF5 831 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 LOC100653049A0A140TA62 436 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 KRT34O76011 436 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 IRF1P10914 325 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 BACE1P56817 501 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 CNGA3Q16281 694 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 PCNX4Q63HM2 1172 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 SMAPO00193 183 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 FAM200BP0CF97 657 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 HMOX2P30519 316 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 PTGER2P43116 358 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 TAF6P49848 677 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 RAD51Q06609 339 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 TBCCQ15814 346 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 KIZQ2M2Z5 673 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 THEMIS2Q5TEJ8 643 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 DENND5BQ6ZUT9 1274 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 STAMBPL1Q96FJ0 436 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 TSPAN17Q96FV3 270 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 CPB2Q96IY4 423 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.69■□□□□ 0.26
PTPN11-201ENST00000351677 NDUFS3O75489 264 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 VCAM1P19320 739 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 TARSP26639 723 aaKnown RBP16.69■□□□□ 0.26
PTPN11-201ENST00000351677 PCSK1P29120 753 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 BOLA3Q53S33 107 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 TFDP3Q5H9I0 405 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 FBXO36Q8NEA4 188 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 MYCBPAPQ8TBZ2 947 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 RAET1EQ8TD07 263 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 PBXIP1Q96AQ6 731 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 ASPSCR1Q9BZE9 553 aa16.69■□□□□ 0.26
PTPN11-201ENST00000351677 SYNDIG1LA6NDD5 238 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 FAM86B1E9PN63 330 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 M0QYT0 321 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 UPP2O95045 317 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 FAM86B2P0C5J1 330 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 GARTP22102 1010 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 ZNF157P51786 506 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 MRPL1Q9BYD6 325 aaKnown RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 VTNP04004 478 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 MGAT5BQ3V5L5 792 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 TFRCP02786 760 aaKnown RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 OTUD4Q01804 1114 aaKnown RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 ANKRD13AQ8IZ07 590 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 CGRRF1Q99675 332 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 TMEM121Q9BTD3 319 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 STX18Q9P2W9 335 aaKnown RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 WTIPA6NIX2 430 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 EPHB2P29323 1055 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 OR1G1P47890 313 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 CORO7P57737 925 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 SLC15A2Q16348 729 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 MPZL3Q6UWV2 235 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 ARID3BQ8IVW6 561 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 FBXO16Q8IX29 292 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 SYTL5Q8TDW5 730 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 TATDN2Q93075 761 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 SH3KBP1Q96B97 665 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 MTBPQ96DY7 904 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 ZNF512Q96ME7 567 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 CDC42EP4Q9H3Q1 356 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms