RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SNRPFP62306 86 aaKnown RBP17.24■□□□□ 0.35
RAB5C-201ENST00000346213 TPM4P67936 248 aa17.24■□□□□ 0.35
RAB5C-201ENST00000346213 DUOXA2Q1HG44 320 aa17.24■□□□□ 0.35
RAB5C-201ENST00000346213 BMP8AQ7Z5Y6 402 aa17.24■□□□□ 0.35
RAB5C-201ENST00000346213 ADGRF2Q8IZF7 708 aa17.24■□□□□ 0.35
RAB5C-201ENST00000346213 PBXIP1Q96AQ6 731 aa17.24■□□□□ 0.35
RAB5C-201ENST00000346213 IL21Q9HBE4 155 aa17.24■□□□□ 0.35
RAB5C-201ENST00000346213 KIAA1586Q9HCI6 787 aa17.24■□□□□ 0.35
RAB5C-201ENST00000346213 CRTAC1Q9NQ79 661 aa17.24■□□□□ 0.35
RAB5C-201ENST00000346213 DDX43Q9NXZ2 648 aaKnown RBP17.24■□□□□ 0.35
RAB5C-201ENST00000346213 MRPS23Q9Y3D9 190 aaKnown RBP17.24■□□□□ 0.35
RAB5C-201ENST00000346213 SHISA7A6NL88 538 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 C4BPAP04003 597 aaKnown RBP17.23■□□□□ 0.35
RAB5C-201ENST00000346213 CFHP08603 1231 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 CD44P16070 742 aaKnown RBP17.23■□□□□ 0.35
RAB5C-201ENST00000346213 PTPN2P17706 415 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 TNNI1P19237 187 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 PNPLA4P41247 253 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 TEAD2Q15562 447 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 TANGO2Q6ICL3 276 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 RTL10Q7L3V2 364 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 TMEM150AQ86TG1 271 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 GPIHBP1Q8IV16 184 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 CACTINQ8WUQ7 758 aaKnown RBP17.23■□□□□ 0.35
RAB5C-201ENST00000346213 DPEP3Q9H4B8 488 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 ABI2Q9NYB9 513 aaPredicted RBP17.23■□□□□ 0.35
RAB5C-201ENST00000346213 GTF3C4Q9UKN8 822 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 MUC6Q6W4X9 2439 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 ZDBF2Q9HCK1 2354 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 PI15O43692 258 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 TNNC2P02585 160 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 TRIM49P0CI25 452 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 TRIM49CP0CI26 452 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 MYL4P12829 197 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 PRCPP42785 496 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 RAP1GAPP47736 663 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 MYL5Q02045 173 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 INTS6LQ5JSJ4 861 aaKnown RBP17.23■□□□□ 0.35
RAB5C-201ENST00000346213 FAM78AQ5JUQ0 283 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 UBALD2Q8IYN6 164 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 GUF1Q8N442 669 aaKnown RBP17.23■□□□□ 0.35
RAB5C-201ENST00000346213 TMEM105Q8N8V8 129 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 PRSS33Q8NF86 280 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 GIPC2Q8TF65 315 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 MRFAP1L1Q96HT8 127 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 SEPT5Q99719 369 aaPredicted RBP17.23■□□□□ 0.35
RAB5C-201ENST00000346213 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 SMYD3Q9H7B4 428 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 IGSF9Q9P2J2 1179 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 DSEQ9UL01 958 aa17.23■□□□□ 0.35
RAB5C-201ENST00000346213 COL4A2P08572 1712 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 A0A1W2PRU2 124 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 GOLGA6L6A8MZA4 724 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 TPM3P06753 285 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 HAPLN1P10915 354 aaPredicted RBP17.22■□□□□ 0.35
RAB5C-201ENST00000346213 PAX3P23760 479 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 CACNA2D1P54289 1103 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 GPC5P78333 572 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 PPP3CAQ08209 521 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 TOP6BLQ8N6T0 577 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 LRRC3BQ96PB8 259 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.22■□□□□ 0.358e-7■■■■■ 104
RAB5C-201ENST00000346213 CGNQ9P2M7 1197 aaKnown RBP17.22■□□□□ 0.35
RAB5C-201ENST00000346213 ZKSCAN5Q9Y2L8 839 aa17.22■□□□□ 0.35
RAB5C-201ENST00000346213 TRIM49BA6NDI0 452 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 TADA3O75528 432 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 HMGA1P17096 107 aaKnown RBP17.21■□□□□ 0.35
RAB5C-201ENST00000346213 NR2F2P24468 414 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 CYP2F1P24903 491 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 CDH8P55286 799 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 CEP135Q66GS9 1140 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 DNAJB7Q7Z6W7 309 aaPredicted RBP17.21■□□□□ 0.35
RAB5C-201ENST00000346213 FBXL6Q8N531 539 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 PSMG2Q969U7 264 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 FNBP1Q96RU3 617 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 OXCT2Q9BYC2 517 aaPredicted RBP17.21■□□□□ 0.35
RAB5C-201ENST00000346213 RRAGDQ9NQL2 400 aaPredicted RBP17.21■□□□□ 0.35
RAB5C-201ENST00000346213 HMGXB4Q9UGU5 601 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 MAFFQ9ULX9 164 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 VPS13AQ96RL7 3174 aa17.21■□□□□ 0.35
RAB5C-201ENST00000346213 HUS1O60921 280 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 ERCC5P28715 1186 aaPredicted RBP17.2■□□□□ 0.34
RAB5C-201ENST00000346213 VIPR2P41587 438 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 CYP4F8P98187 520 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 SURF1Q15526 300 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 DDR2Q16832 855 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 MGAT5BQ3V5L5 792 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 FAM171BQ6P995 826 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 PDZD4Q76G19 769 aaPredicted RBP17.2■□□□□ 0.34
RAB5C-201ENST00000346213 METTL23Q86XA0 190 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 SIX5Q8N196 739 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 RIN3Q8TB24 985 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 ASB16Q96NS5 453 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 ACBD6Q9BR61 282 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 APOBEC3GQ9HC16 384 aaKnown RBP17.2■□□□□ 0.34
RAB5C-201ENST00000346213 CA14Q9ULX7 337 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 PDGFRBP09619 1106 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 WARSP23381 471 aaKnown RBP17.2■□□□□ 0.34
RAB5C-201ENST00000346213 NFIL3Q16649 462 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms