RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 SKA1Q96BD8 255 aa22.49■■□□□ 1.19
TRIM3-201ENST00000345851 ZWILCHQ9H900 591 aa22.49■■□□□ 1.19
TRIM3-201ENST00000345851 LARSQ9P2J5 1176 aaKnown RBP22.49■■□□□ 1.19
TRIM3-201ENST00000345851 PGAP2Q9UHJ9 254 aa22.49■■□□□ 1.19
TRIM3-201ENST00000345851 ZNFX1Q9P2E3 1918 aaKnown RBP22.49■■□□□ 1.19
TRIM3-201ENST00000345851 RNASEH1O60930 286 aaKnown RBP22.48■■□□□ 1.19
TRIM3-201ENST00000345851 TAS2R40P59535 323 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 ARHGAP18Q8N392 663 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 SHC3Q92529 594 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 ECSITQ9BQ95 431 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 DNPEPQ9ULA0 475 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 FCHO1O14526 889 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 DNALI1O14645 258 aaPredicted RBP22.48■■□□□ 1.19
TRIM3-201ENST00000345851 ENO1P06733 434 aaKnown RBP22.48■■□□□ 1.19
TRIM3-201ENST00000345851 RARBP10826 455 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 SREBF1P36956 1147 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 ALYREFQ86V81 257 aaKnown RBP22.48■■□□□ 1.19
TRIM3-201ENST00000345851 ZNF276Q8N554 614 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 TAB3Q8N5C8 712 aaPredicted RBP22.48■■□□□ 1.19
TRIM3-201ENST00000345851 HAUS1Q96CS2 278 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 ZBED3Q96IU2 234 aaPredicted RBP22.48■■□□□ 1.19
TRIM3-201ENST00000345851 CENPKQ9BS16 269 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 TUBB6Q9BUF5 446 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 NMUR2Q9GZQ4 415 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 KCNK13Q9HB14 408 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 MYL2P10916 166 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 SSTR1P30872 391 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 MFAP3P55082 362 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 SEL1LQ9UBV2 794 aa22.48■■□□□ 1.19
TRIM3-201ENST00000345851 A6NJR5 290 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 OPHN1O60890 802 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 CDK7P50613 346 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 VTI1AQ96AJ9 217 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 hCG_2014768A0A024R1R8 64 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 ARL4CP56559 192 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 TFDP1Q14186 410 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 RIPOR1Q6ZS17 1223 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 TRMT1LQ7Z2T5 733 aaKnown RBP22.47■■□□□ 1.19
TRIM3-201ENST00000345851 SLC9A9Q8IVB4 645 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 KLHL23Q8NBE8 558 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 TTC17Q96AE7 1141 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 ETNK2Q9NVF9 386 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 NDE1Q9NXR1 346 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 DDX43Q9NXZ2 648 aaKnown RBP22.47■■□□□ 1.19
TRIM3-201ENST00000345851 GALNT8Q9NY28 637 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 ATXN10Q9UBB4 475 aa22.47■■□□□ 1.19
TRIM3-201ENST00000345851 UBE4BO95155 1302 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 IFNB1P01574 187 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 SLC1A1P43005 524 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 CDC16Q13042 620 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 ATP13A4Q4VNC1 1196 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 PABPC1LQ4VXU2 614 aaKnown RBP22.46■■□□□ 1.19
TRIM3-201ENST00000345851 NBPF12Q5TAG4 269 aaPredicted RBP22.46■■□□□ 1.19
TRIM3-201ENST00000345851 DLK2Q6UY11 383 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 CPXCR1Q8N123 301 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 FAM84AQ96KN4 292 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 EBF3Q9H4W6 596 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 HACL1Q9UJ83 578 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 STK24Q9Y6E0 443 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 GRIN3BO60391 1043 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 ATF7P17544 494 aaPredicted RBP22.46■■□□□ 1.19
TRIM3-201ENST00000345851 SSTR3P32745 418 aaPredicted RBP22.46■■□□□ 1.19
TRIM3-201ENST00000345851 GAD2Q05329 585 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 RASA2Q15283 850 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 OTOP1Q7RTM1 612 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 FAM83AQ86UY5 434 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 AGBL1Q96MI9 1066 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 MMADHCQ9H3L0 296 aaPredicted RBP22.46■■□□□ 1.19
TRIM3-201ENST00000345851 HSPBP1Q9NZL4 362 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 PPM1HQ9ULR3 514 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 PHF24Q9UPV7 400 aa22.46■■□□□ 1.19
TRIM3-201ENST00000345851 FAM237BA0A1B0GVD1 139 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 BGNP21810 368 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 KDSRQ06136 332 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 CLEC16AQ2KHT3 1053 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 ARHGAP24Q8N264 748 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 DDX1Q92499 740 aaKnown RBP22.45■■□□□ 1.18
TRIM3-201ENST00000345851 OXNAD1Q96HP4 312 aaPredicted RBP22.45■■□□□ 1.18
TRIM3-201ENST00000345851 TEPSINQ96N21 525 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 THTPAQ9BU02 230 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 ARHGEF4Q9NR80 690 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 HOMER2Q9NSB8 354 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 A8MXQ7 604 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 GEMIN4P57678 1058 aaKnown RBP22.45■■□□□ 1.18
TRIM3-201ENST00000345851 MARK2Q7KZI7 788 aaKnown RBP22.45■■□□□ 1.18
TRIM3-201ENST00000345851 DAW1Q8N136 415 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 MTMR14Q8NCE2 650 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 CCDC110Q8TBZ0 833 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 PANX3Q96QZ0 392 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 SH2D3AQ9BRG2 576 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 WDR18Q9BV38 432 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 TOPORSQ9NS56 1045 aaPredicted RBP22.45■■□□□ 1.18
TRIM3-201ENST00000345851 ZNF541Q9H0D2 1346 aa22.45■■□□□ 1.18
TRIM3-201ENST00000345851 ADRB2P07550 413 aa22.44■■□□□ 1.18
TRIM3-201ENST00000345851 GPX6P59796 221 aa22.44■■□□□ 1.18
TRIM3-201ENST00000345851 PRKG1Q13976 671 aa22.44■■□□□ 1.18
TRIM3-201ENST00000345851 MYBPC3Q14896 1274 aa22.44■■□□□ 1.18
TRIM3-201ENST00000345851 MCOLN2Q8IZK6 566 aa22.44■■□□□ 1.18
TRIM3-201ENST00000345851 RBM15BQ8NDT2 890 aaKnown RBP22.44■■□□□ 1.18
TRIM3-201ENST00000345851 NCSTNQ92542 709 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms