RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 OSMRQ99650 979 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 NIF3L1Q9GZT8 377 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 AP5M1Q9H0R1 490 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 CNOT8Q9UFF9 292 aaKnown RBP9.83□□□□□ -0.84
ATG4A-202ENST00000345734 DMGDHQ9UI17 866 aaKnown RBP9.83□□□□□ -0.84
ATG4A-202ENST00000345734 GTF3C4Q9UKN8 822 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 SCN1AP35498 2009 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 MBLAC1A4D2B0 266 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 MYADML2A6NDP7 307 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 HAS3O00219 553 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 TREHO43280 583 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 THAP12O43422 761 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 CA12O43570 354 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 MTA2O94776 668 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 CYP1A1P04798 512 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 HOXA11P31270 313 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 ASPAP45381 313 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 RAP1GAPP47736 663 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 CPT1AP50416 773 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 ADAM17P78536 824 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 ZNF394Q53GI3 561 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 GSPT2Q8IYD1 628 aaKnown RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 MCOLN2Q8IZK6 566 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 ACTRT1Q8TDG2 376 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 HNRNPLLQ8WVV9 542 aaKnown RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 ZSWIM1Q9BR11 485 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 CXCL16Q9H2A7 254 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 PLEKHA4Q9H4M7 779 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 CISHQ9NSE2 258 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 NXF1Q9UBU9 619 aaKnown RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 FEZ2Q9UHY8 353 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 GABRQQ9UN88 632 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 NOC2LQ9Y3T9 749 aaKnown RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 SMIM35A0A1B0GVV1 85 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 SERTM1A2A2V5 107 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 NDUFB5O43674 189 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 KIF1CO43896 1103 aaKnown RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 FZD6O60353 706 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 NPTXRO95502 500 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 ITGB3P05106 788 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 MYBL2P10244 700 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 COMTP21964 271 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 RRM1P23921 792 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 TNNT3P45378 269 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 MARCKSL1P49006 195 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 FSCN1Q16658 493 aaKnown RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 CYP4F22Q6NT55 531 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 C11orf63Q6NUN7 778 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 CATSPER4Q7RTX7 472 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 ALDH16A1Q8IZ83 802 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 CXorf38Q8TB03 319 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 ALG3Q92685 438 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 KRT35Q92764 455 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 FAM161BQ96MY7 647 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 KRT12Q99456 494 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 SELENOOQ9BVL4 669 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 AP1M1Q9BXS5 423 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 FUT8Q9BYC5 575 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 GCOM2Q9BZD3 368 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-202ENST00000345734 TRIM7Q9C029 511 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 FAM53CQ9NYF3 392 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 TMEM59LQ9UK28 342 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 HRH3Q9Y5N1 445 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 MROH7Q68CQ1 1323 aa9.82□□□□□ -0.84
ATG4A-202ENST00000345734 PGRMC1O00264 195 aaKnown RBP9.81□□□□□ -0.84
ATG4A-202ENST00000345734 PSMC4P43686 418 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 NSFP46459 744 aaKnown RBP9.81□□□□□ -0.84
ATG4A-202ENST00000345734 CDH8P55286 799 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 NOMO3P69849 1222 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 CAP1Q01518 475 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 KCTD19Q17RG1 926 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-202ENST00000345734 AADACL2Q6P093 401 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 RASGEF1CQ8N431 466 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 ZNF606Q8WXB4 792 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 ACAP3Q96P50 834 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 C11orf70Q9BRQ4 267 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 ADPGKQ9BRR6 497 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 EIF2AQ9BY44 585 aaKnown RBP9.81□□□□□ -0.84
ATG4A-202ENST00000345734 UVRAGQ9P2Y5 699 aa9.81□□□□□ -0.84
ATG4A-202ENST00000345734 RALGAPA2Q2PPJ7 1873 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 TTC24A2A3L6 582 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-202ENST00000345734 ERLIN1O75477 346 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 TUBBP07437 444 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 ITGA4P13612 1032 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 AKR1A1P14550 325 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 DARSP14868 501 aaKnown RBP9.8□□□□□ -0.84
ATG4A-202ENST00000345734 NPR3P17342 541 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 POLR2BP30876 1174 aaKnown RBP9.8□□□□□ -0.84
ATG4A-202ENST00000345734 NOS2P35228 1153 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 MAPK8P45983 427 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 GTF2A1P52655 376 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-202ENST00000345734 PURAQ00577 322 aaKnown RBP9.8□□□□□ -0.84
ATG4A-202ENST00000345734 TMEM132DQ14C87 1099 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 WDR72Q3MJ13 1102 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 CCDC70Q6NSX1 233 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 C8orf74Q6P047 294 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 MON1BQ7L1V2 547 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 KLHL7Q8IXQ5 586 aa9.8□□□□□ -0.84
ATG4A-202ENST00000345734 ETFBKMTQ8IXQ9 262 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms