RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 MYBL1P10243 752 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 CCDC130P13994 396 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 HSPA6P17066 643 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 SAT1P21673 171 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 HOXD10P28358 340 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 ARL4AP40617 200 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 HTRA3P83110 453 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 ITKQ08881 620 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 ZKSCAN8Q15776 578 aaPredicted RBP9.12□□□□□ -0.95
SKAP2-201ENST00000345317 FAXCQ5TGI0 409 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 OLFML2BQ68BL8 750 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 B3GNT9Q6UX72 402 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 LRRC31Q6UY01 552 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 EGFL6Q8IUX8 553 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 PPP1R14CQ8TAE6 165 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 ADAM32Q8TC27 787 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 FBXO25Q8TCJ0 367 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 RBM41Q96IZ5 413 aaKnown RBP9.12□□□□□ -0.95
SKAP2-201ENST00000345317 ZNF560Q96MR9 790 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 ZIM3Q96PE6 472 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 LPIN3Q9BQK8 851 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 FAM53CQ9NYF3 392 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 TXNDC16Q9P2K2 825 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 TUBGCP4Q9UGJ1 667 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 NR2E1Q9Y466 385 aa9.12□□□□□ -0.95
SKAP2-201ENST00000345317 COL2A1P02458 1487 aaPredicted RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 C22orf31O95567 290 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 MCF2P10911 925 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 ACO1P21399 889 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 MLH1P40692 756 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 JAM2P57087 298 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 RTP1P59025 263 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 ACTN3Q08043 901 aaPredicted RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 CUL1Q13616 776 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 TMED2Q15363 201 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 SWT1Q5T5J6 900 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 P3H4Q92791 437 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 THOC1Q96FV9 657 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 PTPN18Q99952 460 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 ARHGAP39Q9C0H5 1083 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 CDHR5Q9HBB8 845 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 PRDM5Q9NQX1 630 aaPredicted RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 TNFSF13BQ9Y275 285 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 CYB561D2O14569 222 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 ATP2A2P16615 1042 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 TAF6P49848 677 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 RABGGTBP53611 331 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 ASTE1Q2TB18 679 aaPredicted RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 FBXO47Q5MNV8 452 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 LDLRAD1Q5T700 205 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 IZUMO3Q5VZ72 239 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 CCDC121Q6ZUS5 278 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 C12orf56Q8IXR9 622 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 CCDC13Q8IYE1 715 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 C1orf127Q8N9H9 656 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 RNF217Q8TC41 542 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 NKIRAS1Q9NYS0 192 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 HPCAL4Q9UM19 191 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 UBQLN1Q9UMX0 589 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 DIS3Q9Y2L1 958 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 CDY2AQ9Y6F7 541 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 KIAA0100Q14667 2235 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 TCRBV7S2A1N4TA0A589 114 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 CCDC78A2IDD5 438 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 TARSL2A2RTX5 802 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 C2CD2LO14523 706 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 VNN1O95497 513 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 RFC1P35251 1148 aaPredicted RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 MAGOHP61326 146 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 RBBP5Q15291 538 aaKnown RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 C15orf59Q2T9L4 293 aaPredicted RBP9.11□□□□□ -0.95
SKAP2-201ENST00000345317 FAM131BQ86XD5 332 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 ST6GALNAC4Q9H4F1 302 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 SLITRK6Q9H5Y7 841 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 MROH7Q68CQ1 1323 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 NRCAMQ92823 1304 aa9.11□□□□□ -0.95
SKAP2-201ENST00000345317 E5RJQ4 531 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 PODXLO00592 558 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 PHF2O75151 1096 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 ASS1P00966 412 aaKnown RBP9.1□□□□□ -0.95
SKAP2-201ENST00000345317 SRGAP2BP0DMP2 458 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 ZBTB48P10074 688 aaPredicted RBP9.1□□□□□ -0.95
SKAP2-201ENST00000345317 RARAP10276 462 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 SCNN1GP51170 649 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 PMS2P54278 862 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 FKBP1BP68106 108 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 PRKCZQ05513 592 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 MBTD1Q05BQ5 628 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 KYNUQ16719 465 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 P3H1Q32P28 736 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 KDELC2Q7Z4H8 507 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 RNF180Q86T96 592 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 GDAP1Q8TB36 358 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 MICAL1Q8TDZ2 1067 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 TNIP3Q96KP6 325 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 ERP44Q9BS26 406 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 CHST7Q9NS84 486 aa9.1□□□□□ -0.95
SKAP2-201ENST00000345317 FNDC3AQ9Y2H6 1198 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms