RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZBTB45Q96K62 511 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 TRIM54Q9BYV2 358 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 AGPAT5Q9NUQ2 364 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 INTUQ9ULD6 942 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 IPPQ9Y573 584 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 MOXD2PA6NHM9 499 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 CCT5P48643 541 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 ATP1A2P50993 1020 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 C1QTNF8P60827 252 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 SLC7A5Q01650 507 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 TRIM65Q6PJ69 517 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 ABRAQ8N0Z2 381 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 OR6P1Q8NGX9 317 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 RAB3IPQ96QF0 476 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 SYT15Q9BQS2 421 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 CAPS2Q9BXY5 557 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 TMEM117Q9H0C3 514 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 CNOT10Q9H9A5 744 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 METTL5Q9NRN9 209 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 THG1LQ9NWX6 298 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 UMODL1Q5DID0 1318 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 TREHO43280 583 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 ACLYP53396 1101 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 MKRN4PQ13434 485 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 ACAD10Q6JQN1 1059 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 CHMP6Q96FZ7 201 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 CCDC151A5D8V7 595 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 MYL6P60660 151 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 RAPGEF5Q92565 580 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 TBK1Q9UHD2 729 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 TTC7AQ9ULT0 858 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 PEAK1Q9H792 1746 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 PSMD10O75832 226 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 CYP2C18P33260 490 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 PPM1AP35813 382 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 ZNF177Q13360 481 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 SCLYQ96I15 445 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 WDCPQ9H6R7 721 aa17.17■□□□□ 0.34
SMARCA4-201ENST00000344626 ACSL3O95573 720 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 SMPD1P17405 629 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 MTA1Q13330 715 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 ARHGEF7Q14155 803 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 C1orf131Q8NDD1 294 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 KCNMB3Q9NPA1 279 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 KCNN4O15554 427 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 ATG16L1Q676U5 607 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 TMEM176AQ96HP8 235 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 KRT82Q9NSB4 513 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 MRPS23Q9Y3D9 190 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 NCK2O43639 380 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 SLC10A3P09131 477 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 PON1P27169 355 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 TWF1Q12792 350 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 PKN2Q16513 984 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 GIPC2Q8TF65 315 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 BAG5Q9UL15 447 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 SLC12A8A0AV02 714 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 ARHGAP42A6NI28 874 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 CRYBB1P53674 252 aaPredicted RBP17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 MAP3K7CLP57077 242 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 CDR2Q01850 454 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 CENPPQ6IPU0 288 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 SNX19Q92543 992 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 INPP4AQ96PE3 977 aaPredicted RBP17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 MTMR9Q96QG7 549 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 DNAJC17Q9NVM6 304 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 NFU1Q9UMS0 254 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 F5H5T6 163 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 CXCL14O95715 111 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 PLPP4Q5VZY2 271 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 CSGALNACT1Q8TDX6 532 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 IL17RAQ96F46 866 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 UROC1Q96N76 676 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 PNMA5Q96PV4 448 aa17.16■□□□□ 0.34
SMARCA4-201ENST00000344626 PAX3P23760 479 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 TRIM67Q6ZTA4 783 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 SARS2Q9NP81 518 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 GOLGA8MH3BSY2 632 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 ADH1AP07327 375 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 SETSIPP0DME0 302 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 CKBP12277 381 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 UNC93B1Q9H1C4 597 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 TRMT13Q9NUP7 481 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 HSPA8P11142 646 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 SLCO1A2P46721 670 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 TUFMP49411 452 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 C1orf54Q8WWF1 131 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 C12orf42Q96LP6 360 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 INTS13Q9NVM9 706 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 M0QYT0 321 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 ARSEP51690 589 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 MNAT1P51948 309 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 CREMQ03060 361 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 NSUN2Q08J23 767 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 C4orf22Q6V702 233 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 HERC6Q8IVU3 1022 aa17.15■□□□□ 0.34
SMARCA4-201ENST00000344626 USP38Q8NB14 1042 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms