RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 GPIHBP1Q8IV16 184 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 YAF2Q8IY57 180 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 GCNAQ96QF7 691 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 MMS19Q96T76 1030 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 TASP1Q9H6P5 420 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 ABCB6Q9NP58 842 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 TRPV5Q9NQA5 729 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 HEBP1Q9NRV9 189 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 MRPS17Q9Y2R5 130 aaKnown RBP21.62■■□□□ 1.05
SYNE2-201ENST00000341472 MTF2Q9Y483 593 aaPredicted RBP21.62■■□□□ 1.05
SYNE2-201ENST00000341472 PDCD11Q14690 1871 aaKnown RBP21.62■■□□□ 1.05
SYNE2-201ENST00000341472 A0A1W2PQ27 194 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 A0A1W2PQ64 194 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 A0A1W2PQD8 194 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 PROB1E7EW31 1015 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 LRRN2O75325 713 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 RPL10AP62906 217 aaKnown RBP21.61■■□□□ 1.05
SYNE2-201ENST00000341472 STXBP5Q5T5C0 1151 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 LIMS2Q7Z4I7 341 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 CCDC47Q96A33 483 aaKnown RBP21.61■■□□□ 1.05
SYNE2-201ENST00000341472 BCO2Q9BYV7 579 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 IL21Q9HBE4 155 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 LTB4R2Q9NPC1 389 aa21.61■■□□□ 1.05
SYNE2-201ENST00000341472 MYBPHLA2RUH7 354 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 MAN2B1O00754 1011 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 DPYSL4O14531 572 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 NCAM2O15394 837 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 RPN1P04843 607 aaKnown RBP21.6■■□□□ 1.05
SYNE2-201ENST00000341472 FAM163BP0C2L3 166 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 GLULP15104 373 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 CYP2F1P24903 491 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 NBL1P41271 181 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 TRPC3Q13507 836 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 DDR2Q16832 855 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 FAM171BQ6P995 826 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 SPATA2LQ8IUW3 424 aaPredicted RBP21.6■■□□□ 1.05
SYNE2-201ENST00000341472 C1orf210Q8IVY1 113 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 FSIP1Q8NA03 581 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 KIAA0895Q8NCT3 520 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 ZNF516Q92618 1163 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 RSPRY1Q96DX4 576 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 PKMYT1Q99640 499 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 MKNK1Q9BUB5 465 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 DMAC2Q9NW81 257 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 CDH9Q9ULB4 789 aa21.6■■□□□ 1.05
SYNE2-201ENST00000341472 PHACTR2O75167 634 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 PDGFRBP09619 1106 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 CSH1P0DML2 217 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 CSH2P0DML3 217 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 HMGA1P17096 107 aaKnown RBP21.59■■□□□ 1.05
SYNE2-201ENST00000341472 WARSP23381 471 aaKnown RBP21.59■■□□□ 1.05
SYNE2-201ENST00000341472 LMO2P25791 158 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 WEE1P30291 646 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 SCN1AP35498 2009 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 GNL1P36915 607 aaPredicted RBP21.59■■□□□ 1.05
SYNE2-201ENST00000341472 GPR15P49685 360 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 SLC9A9Q8IVB4 645 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 SLC46A2Q9BY10 475 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 ZMYM5Q9UJ78 669 aa21.59■■□□□ 1.05
SYNE2-201ENST00000341472 PDXKO00764 312 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 CHADO15335 359 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 HCRTO43612 131 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 GFRA3O60609 400 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 ATP2C2O75185 946 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 F11P03951 625 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 AP3M2P53677 418 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 CYP4F8P98187 520 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 WDR72Q3MJ13 1102 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 SDHAF4Q5VUM1 108 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 C4orf50Q6ZRC1 276 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 FRMD5Q7Z6J6 570 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 TMEM174Q8WUU8 243 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 KBTBD7Q8WVZ9 684 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 FUBP3Q96I24 572 aaKnown RBP eCLIP21.58■■□□□ 1.05
SYNE2-201ENST00000341472 SYT15Q9BQS2 421 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 GZF1Q9H116 711 aaPredicted RBP21.58■■□□□ 1.05
SYNE2-201ENST00000341472 SNX25Q9H3E2 840 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 KCTD10Q9H3F6 313 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 OBP2AQ9NY56 170 aa21.58■■□□□ 1.05
SYNE2-201ENST00000341472 MAGEC2Q9UBF1 373 aaPredicted RBP21.58■■□□□ 1.05
SYNE2-201ENST00000341472 MAGED2Q9UNF1 606 aaPredicted RBP21.58■■□□□ 1.05
SYNE2-201ENST00000341472 KMT2EQ8IZD2 1858 aa21.58■■□□□ 1.04
SYNE2-201ENST00000341472 PTPRZ1P23471 2315 aaPredicted RBP21.57■■□□□ 1.04
SYNE2-201ENST00000341472 KIF20AO95235 890 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 TARSP26639 723 aaKnown RBP21.57■■□□□ 1.04
SYNE2-201ENST00000341472 ATICP31939 592 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 MAGEA9P43362 315 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 CASP4P49662 377 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 NLRP12P59046 1061 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 MYL6P60660 151 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 TNNC1P63316 161 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 FCHO2Q0JRZ9 810 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 MAPRE1Q15691 268 aaKnown RBP21.57■■□□□ 1.04
SYNE2-201ENST00000341472 CFAP221Q4G0U5 840 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 KRBA2Q6ZNG9 492 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 SCN4BQ8IWT1 228 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 CSGALNACT1Q8TDX6 532 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 PARD3BQ8TEW8 1205 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 CLDN23Q96B33 292 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 LRRC3BQ96PB8 259 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms