RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 SFMBT2Q5VUG0 894 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 LRRTM3Q86VH5 581 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 C12orf29Q8N999 325 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 EPS8L1Q8TE68 723 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 TFAP2BQ92481 460 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
CMC1-201ENST00000334841 SYN2Q92777 582 aaPredicted RBP16.1■□□□□ 0.17
CMC1-201ENST00000334841 LRCH3Q96II8 777 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 TNIP3Q96KP6 325 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 OXCT2Q9BYC2 517 aaPredicted RBP16.1■□□□□ 0.17
CMC1-201ENST00000334841 LMAN2LQ9H0V9 348 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 RXFP1Q9HBX9 757 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 FAM49BQ9NUQ9 324 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 TMLHEQ9NVH6 421 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 AIPL1Q9NZN9 384 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 IRAK3Q9Y616 596 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 CHD7Q9P2D1 2997 aa16.1■□□□□ 0.17
CMC1-201ENST00000334841 C2orf71A6NGG8 1288 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 CXCL14O95715 111 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 CNPP09543 421 aaKnown RBP16.09■□□□□ 0.17
CMC1-201ENST00000334841 CCDC130P13994 396 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 CPB1P15086 417 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 CD19P15391 556 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 CYP11B1P15538 503 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 FERP16591 822 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 GNA15P30679 374 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 CDR1P51861 262 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 TSPY1Q01534 308 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 ROR1Q01973 937 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 CREMQ03060 361 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 FAM171BQ6P995 826 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 IRF2BP2Q7Z5L9 587 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 NOP9Q86U38 636 aaKnown RBP16.09■□□□□ 0.17
CMC1-201ENST00000334841 GLYCTKQ8IVS8 523 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 MYCBPAPQ8TBZ2 947 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 MYLPFQ96A32 169 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 HEXIM2Q96MH2 286 aaKnown RBP16.09■□□□□ 0.17
CMC1-201ENST00000334841 NUCKS1Q9H1E3 243 aaKnown RBP16.09■□□□□ 0.17
CMC1-201ENST00000334841 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.09■□□□□ 0.17
CMC1-201ENST00000334841 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 NOCTQ9UK39 431 aaKnown RBP16.09■□□□□ 0.17
CMC1-201ENST00000334841 GTF3C4Q9UKN8 822 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 SSX2IPQ9Y2D8 614 aa16.09■□□□□ 0.17
CMC1-201ENST00000334841 WDR27A2RRH5 827 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 O00370 1275 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 TEX28O15482 410 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 VNN2O95498 520 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 VDRP11473 427 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 HNRNPH3P31942 346 aaKnown RBP16.08■□□□□ 0.16
CMC1-201ENST00000334841 OR1D2P34982 312 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 PRKCIP41743 596 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 NDUFV1P49821 464 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 PDE6CP51160 858 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 ARPP19P56211 112 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 PTK2Q05397 1052 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 SLC39A12Q504Y0 691 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 SGO2Q562F6 1265 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 HGSNATQ68CP4 663 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 WDR59Q6PJI9 974 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 FUKQ8N0W3 1084 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 MRPL43Q8N983 215 aaKnown RBP16.08■□□□□ 0.16
CMC1-201ENST00000334841 OR8K1Q8NGG5 319 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 OLIG1Q8TAK6 271 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 SLC20A1Q8WUM9 679 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 DDX1Q92499 740 aaKnown RBP16.08■□□□□ 0.16
CMC1-201ENST00000334841 PCED1BQ96HM7 432 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 KLHL5Q96PQ7 755 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 RHOBTB2Q9BYZ6 727 aa16.08■□□□□ 0.16
CMC1-201ENST00000334841 NGRNQ9NPE2 291 aaKnown RBP16.08■□□□□ 0.16
CMC1-201ENST00000334841 MTMR11A4FU01 709 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 GOLGA6L6A8MZA4 724 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 THAP12O43422 761 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 CFHP08603 1231 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 SSTR3P32745 418 aaPredicted RBP16.07■□□□□ 0.16
CMC1-201ENST00000334841 BPIFB4P59827 614 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 GPR17Q13304 367 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 MEA1Q16626 185 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 PPP1R26Q5T8A7 1209 aaPredicted RBP16.07■□□□□ 0.16
CMC1-201ENST00000334841 ARHGAP17Q68EM7 881 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 PDE12Q6L8Q7 609 aaKnown RBP16.07■□□□□ 0.16
CMC1-201ENST00000334841 RNF19BQ6ZMZ0 732 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 PAQR9Q6ZVX9 377 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 FMNL3Q8IVF7 1028 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 DCP1BQ8IZD4 617 aaKnown RBP16.07■□□□□ 0.16
CMC1-201ENST00000334841 SLC2A14Q8TDB8 520 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 MICAL1Q8TDZ2 1067 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 PGLYRP2Q96PD5 576 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 SYT11Q9BT88 431 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 B3GNT5Q9BYG0 378 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 DNAI2Q9GZS0 605 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 PRDM12Q9H4Q4 367 aa16.07■□□□□ 0.16
CMC1-201ENST00000334841 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
CMC1-201ENST00000334841 CLDN5O00501 218 aa16.06■□□□□ 0.16
CMC1-201ENST00000334841 PLEKP08567 350 aaPredicted RBP16.06■□□□□ 0.16
CMC1-201ENST00000334841 SKILP12757 684 aa16.06■□□□□ 0.16
CMC1-201ENST00000334841 CHRNB2P17787 502 aa16.06■□□□□ 0.16
CMC1-201ENST00000334841 ADORA2BP29275 332 aa16.06■□□□□ 0.16
CMC1-201ENST00000334841 CYP27A1Q02318 531 aa16.06■□□□□ 0.16
CMC1-201ENST00000334841 RAB33AQ14088 237 aa16.06■□□□□ 0.16
CMC1-201ENST00000334841 BMS1Q14692 1282 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms