RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 NFKBIEO00221 500 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 RNASEH1O60930 286 aaKnown RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 AP2B1P63010 937 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 PHLDB2Q86SQ0 1253 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 LRRC43Q8N309 656 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 JDP2Q8WYK2 163 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 AMNQ9BXJ7 453 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 C12orf65Q9H3J6 166 aaKnown RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 KANSL3Q9P2N6 904 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 USP1O94782 785 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 VAV1P15498 845 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 GCAP28676 217 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 CETN1Q12798 172 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 ARHGEF19Q8IW93 802 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 SLFN12Q8IYM2 578 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 CCDC110Q8TBZ0 833 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 PSPC1Q8WXF1 523 aaKnown RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 TMEM120AQ9BXJ8 343 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 MAK16Q9BXY0 300 aaKnown RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 TBC1D30Q9Y2I9 924 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 CCDC160A6NGH7 325 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 ALOX15P16050 662 aaPredicted RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 OXCT1P55809 520 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 TTLL12Q14166 644 aaPredicted RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 TBC1D10BQ4KMP7 808 aaPredicted RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 TTC7BQ86TV6 843 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 RASSF3Q86WH2 238 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 LRRC6Q86X45 466 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 SNRNP27Q8WVK2 155 aaKnown RBP19.06■□□□□ 0.64
PKP3-201ENST00000331563 PPP2R3CQ969Q6 453 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 MYOZ2Q9NPC6 264 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 ANAPC7Q9UJX3 599 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 NEU2Q9Y3R4 380 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 CFBP00751 764 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 PABPC4LP0CB38 370 aaKnown RBP19.05■□□□□ 0.64
PKP3-201ENST00000331563 MAPK4P31152 587 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 MDH1BQ5I0G3 518 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 CIAPIN1Q6FI81 312 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 NAP1L4Q99733 375 aaKnown RBP19.05■□□□□ 0.64
PKP3-201ENST00000331563 HERPUD2Q9BSE4 406 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 TSSK1BQ9BXA7 367 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 MANSC1Q9H8J5 431 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 RABGAP1Q9Y3P9 1069 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 GJC1P36383 396 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 CDC16Q13042 620 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 FASTKD3Q14CZ7 662 aaKnown RBP19.05■□□□□ 0.64
PKP3-201ENST00000331563 SLC44A4Q53GD3 710 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 GMCL1P1Q8NEA9 526 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 SLC16A10Q8TF71 515 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 KAT5Q92993 513 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 KLF6Q99612 283 aaPredicted RBP19.05■□□□□ 0.64
PKP3-201ENST00000331563 EBF3Q9H4W6 596 aa19.05■□□□□ 0.64
PKP3-201ENST00000331563 HERC5Q9UII4 1024 aaKnown RBP19.05■□□□□ 0.64
PKP3-201ENST00000331563 CYP26A1O43174 497 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 ABHD2P08910 425 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 IDO1P14902 403 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 RPA1P27694 616 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 STAT2P52630 851 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 C1orf146Q5VVC0 180 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 NOP9Q86U38 636 aaKnown RBP19.04■□□□□ 0.64
PKP3-201ENST00000331563 SLC25A41Q8N5S1 370 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 GMCL1Q96IK5 515 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 CLPTM1LQ96KA5 538 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 FAM81BQ96LP2 452 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 FAM86B1E9PN63 330 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 TXNDC9O14530 226 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 TYROBPO43914 113 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 PIAS1O75925 651 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 ENO1P06733 434 aaKnown RBP19.04■□□□□ 0.64
PKP3-201ENST00000331563 FAM86B2P0C5J1 330 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 SPATA31C1P0DKV0 1188 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 PRELPP51888 382 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 SLC18A1P54219 525 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 ARHGAP4P98171 946 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 RIPOR1Q6ZS17 1223 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 SATL1Q86VE3 508 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 MAP7D3Q8IWC1 876 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 DNAJC1Q96KC8 554 aaKnown RBP19.04■□□□□ 0.64
PKP3-201ENST00000331563 THTPAQ9BU02 230 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 MKNK1Q9BUB5 465 aa19.04■□□□□ 0.64
PKP3-201ENST00000331563 MTO1Q9Y2Z2 717 aaKnown RBP19.04■□□□□ 0.64
PKP3-201ENST00000331563 MTA2O94776 668 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 RALAP11233 206 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 ADARP55265 1226 aaKnown RBP19.03■□□□□ 0.64
PKP3-201ENST00000331563 CDK16Q00536 496 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 BFSP1Q12934 665 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 MED21Q13503 144 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 TMEM259Q4ZIN3 620 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 SCUBE1Q8IWY4 988 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 ZBED8Q8IZ13 594 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 ZCCHC9Q8N567 271 aaKnown RBP19.03■□□□□ 0.64
PKP3-201ENST00000331563 EMSYQ7Z589 1322 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 RARBP10826 455 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 HARSP12081 509 aaKnown RBP19.03■□□□□ 0.64
PKP3-201ENST00000331563 VARSP26640 1264 aaKnown RBP19.03■□□□□ 0.64
PKP3-201ENST00000331563 MLH1P40692 756 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 TCEAL1Q15170 157 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 ZFYVE27Q5T4F4 411 aa19.03■□□□□ 0.64
PKP3-201ENST00000331563 PPP1R18Q6NYC8 613 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms