RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 JDP2Q8WYK2 163 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 FAM136AQ96C01 138 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 RBM17Q96I25 401 aaKnown RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 ANKRD27Q96NW4 1050 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 SHCBP1LQ9BZQ2 653 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 FBXO28Q9NVF7 368 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 CHMP2BQ9UQN3 213 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 MEI4A8MW99 385 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 MAGEB2O15479 319 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 PRPF4O43172 522 aaKnown RBP eCLIP8.28□□□□□ -1.08
VMA21-201ENST00000330374 TYROBPO43914 113 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 LPXNO60711 386 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 OPHN1O60890 802 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 CRKP46108 304 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 HIF1AQ16665 826 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 MSS51Q4VC12 460 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 EPAS1Q99814 870 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 MECRQ9BV79 373 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 CDCA7Q9BWT1 371 aaPredicted RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 NMUR2Q9GZQ4 415 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 ASB3Q9Y575 518 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 NHSQ6T4R5 1651 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 DENND3A2RUS2 1198 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 FCHO1O14526 889 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 MT-ND3P03897 115 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 MUTP22033 750 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 GLRA2P23416 452 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 GSTT1P30711 240 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 ARL4CP56559 192 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 GPX6P59796 221 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 KLF1Q13351 362 aaPredicted RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 CUL3Q13618 768 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 SMAD1Q15797 465 aaKnown RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 LIN9Q5TKA1 542 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 CTAGE3PQ8IX95 158 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 ZNF454Q8N9F8 522 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 SH3TC2Q8TF17 1288 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 SMYD3Q9H7B4 428 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 SYNCQ9H7C4 482 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 ZWILCHQ9H900 591 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 NYAP2Q9P242 653 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 PCDHB4Q9Y5E5 795 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 IKBKGQ9Y6K9 419 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 TXNDC9O14530 226 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 HNRNPDLO14979 420 aaKnown RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 LIASO43766 372 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 RNF8O76064 485 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 STAT2P52630 851 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 GEMIN4P57678 1058 aaKnown RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 KCNT1Q5JUK3 1230 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 FNBP1LQ5T0N5 605 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 CPXCR1Q8N123 301 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 RIBC1Q8N443 379 aaPredicted RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 SHKBP1Q8TBC3 707 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 UBE4BO95155 1302 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 CNTNAP4Q9C0A0 1308 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 F8VP50 259 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 ZWINTO95229 277 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SERPINB2P05120 415 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 ALDH18A1P54886 795 aaKnown RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 BASP1P80723 227 aaKnown RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 TRAF1Q13077 416 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 USP4Q13107 963 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 RASA2Q15283 850 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 DCUN1D2Q6PH85 259 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SH3BP5LQ7L8J4 393 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 FBXO36Q8NEA4 188 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 RILPQ96NA2 401 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 TUBGCP5Q96RT8 1024 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 ZNF184Q99676 751 aaPredicted RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 GORASP1Q9BQQ3 440 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 IQCGQ9H095 443 aaKnown RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 KRT82Q9NSB4 513 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 PI4KBQ9UBF8 816 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 AGTPBP1Q9UPW5 1226 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 ABCA3Q99758 1704 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 ARHGAP42A6NI28 874 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SCAMP3O14828 347 aaKnown RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 MYCLP12524 364 aaPredicted RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 GCLCP48506 637 aaPredicted RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 RARRES1P49788 294 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 YWHAGP61981 247 aaKnown RBP eCLIP8.27□□□□□ -1.09
VMA21-201ENST00000330374 UGCGQ16739 394 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SGSM1Q2NKQ1 1148 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 REM2Q8IYK8 340 aaPredicted RBP8.27□□□□□ -1.09
VMA21-201ENST00000330374 IL31RAQ8NI17 732 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 TTC25Q96NG3 672 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SLC13A1Q9BZW2 595 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 TMEM8AQ9HCN3 771 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 KLHL42Q9P2K6 505 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 UMODL1Q5DID0 1318 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 TAF1LQ8IZX4 1826 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 TCRBV7S3A2A0A539 114 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 MAGEA13PA6NCF6 341 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SIGLEC16A6NMB1 481 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 P4HA2O15460 535 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 FAM155BO75949 473 aa8.27□□□□□ -1.09
VMA21-201ENST00000330374 SLC1A1P43005 524 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms