RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TTC9BQ8N6N2 239 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 ATAD1Q8NBU5 361 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 SETD7Q8WTS6 366 aaKnown RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 HMGB4Q8WW32 186 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 FAM20AQ96MK3 541 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 TCEANC2Q96MN5 208 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 OXCT2Q9BYC2 517 aaPredicted RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 KCNMB3Q9NPA1 279 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 VPS54Q9P1Q0 977 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 DNMT3LQ9UJW3 386 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 MGAQ8IWI9 3026 aa16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 TEP1Q99973 2627 aaKnown RBP16.11■□□□□ 0.17
CTHRC1-201ENST00000330295 COL5A1P20908 1838 aaPredicted RBP16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 MTMR11A4FU01 709 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 ERVH48-1M5A8F1 160 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 ACKR2O00590 384 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 RRP8O43159 456 aaKnown RBP16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 OAZ2O95190 189 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 EDN1P05305 212 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 MRPS21P82921 87 aaKnown RBP16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 PLEKHG6Q3KR16 790 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 ALKAL1Q6UXT8 129 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 Q6ZUG5 572 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 MAB21L3Q8N8X9 362 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 ATP2A3Q93084 1043 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 ZMAT2Q96NC0 199 aaKnown RBP16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 PNMA5Q96PV4 448 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 TM6SF1Q9BZW5 370 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 C2orf40Q9H1Z8 148 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 GPRC5CQ9NQ84 441 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 MYO9AB2RTY4 2548 aa16.1■□□□□ 0.17
CTHRC1-201ENST00000330295 TLX3O43711 291 aaPredicted RBP16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 LIG1P18858 919 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 YARSP54577 528 aaKnown RBP16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 MTF1Q14872 753 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 NCAPH2Q6IBW4 605 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 SLC36A4Q6YBV0 504 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 PGBD3Q8N328 593 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 FBXL16Q8N461 479 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 BAHD1Q8TBE0 780 aaPredicted RBP16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 OSCP1Q8WVF1 389 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 BRF1Q92994 677 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 CCDC113Q9H0I3 377 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 TOPORSQ9NS56 1045 aaPredicted RBP16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 ANKEF1Q9NU02 776 aa16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 DUS2Q9NX74 493 aaKnown RBP16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
CTHRC1-201ENST00000330295 OR6C75A6NL08 312 aa16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 SLITRK3O94933 977 aa16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 GRIK2Q13002 908 aa16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 VEPH1Q14D04 833 aa16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 MAEAQ7L5Y9 396 aa16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 SLC41A1Q8IVJ1 513 aa16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 ALLCQ8N6M5 410 aa16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 TXNDC5Q8NBS9 432 aaKnown RBP16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 PRDM16Q9HAZ2 1276 aa16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 TIMM13Q9Y5L4 95 aaPredicted RBP16.08■□□□□ 0.16
CTHRC1-201ENST00000330295 DOPEY2Q9Y3R5 2298 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 GOLGA8CPA6NN73 597 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 SGK1O00141 431 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 PLK4O00444 970 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 USO1O60763 962 aaKnown RBP16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 LYPLA2O95372 231 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 DDX6P26196 483 aaKnown RBP eCLIP16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 IFNAR2P48551 515 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 RARRES1P49788 294 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 NLRP5P59047 1200 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 ANAPC15P60006 121 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 NR1H3Q13133 447 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 ZNF268Q14587 947 aaPredicted RBP16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 SMAD1Q15797 465 aaKnown RBP16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 EML3Q32P44 896 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 TMEM150AQ86TG1 271 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 CEP120Q8N960 986 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 IL17RCQ8NAC3 791 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 C18orf25Q96B23 403 aaPredicted RBP16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 NXPE2Q96DL1 559 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 WBP1Q96G27 269 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 CDC6Q99741 560 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 CCDC94Q9BW85 323 aaPredicted RBP16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 ZDHHC5Q9C0B5 715 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 FAM124BQ9H5Z6 455 aaPredicted RBP16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 ZSWIM6Q9HCJ5 1215 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 HSFX1Q9UBD0 423 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 SUSD2Q9UGT4 822 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 WNT6Q9Y6F9 365 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 OBSL1O75147 1896 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 COL12A1Q99715 3063 aa16.07■□□□□ 0.16
CTHRC1-201ENST00000330295 TCRBV21S2A2A0A5A6 115 aa16.06■□□□□ 0.16
CTHRC1-201ENST00000330295 M0QZQ0 153 aa16.06■□□□□ 0.16
CTHRC1-201ENST00000330295 SLC28A2O43868 658 aa16.06■□□□□ 0.16
CTHRC1-201ENST00000330295 LARGE1O95461 756 aa16.06■□□□□ 0.16
CTHRC1-201ENST00000330295 KLF8O95600 359 aaPredicted RBP16.06■□□□□ 0.16
CTHRC1-201ENST00000330295 CPA1P15085 419 aa16.06■□□□□ 0.16
CTHRC1-201ENST00000330295 KCNE1P15382 129 aa16.06■□□□□ 0.16
CTHRC1-201ENST00000330295 ATF6P18850 670 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms