RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TTLL13PA6NNM8 815 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 SULT1E1P49888 294 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 MYBPC2Q14324 1141 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 NXNQ6DKJ4 435 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 SLC7A14Q8TBB6 771 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 APOL2Q9BQE5 337 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 TRAIPQ9BWF2 469 aa16.83■□□□□ 0.28
SYNM-201ENST00000328642 BTAF1O14981 1849 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 FZD9O00144 591 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 SLC12A2P55011 1212 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 TAS2R40P59535 323 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 GCNT1Q02742 428 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 PIGHQ14442 188 aaPredicted RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 WDR49Q8IV35 697 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 PRELID2Q8N945 189 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 MAML1Q92585 1016 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 CACNG4Q9UBN1 327 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 CTNNAL1Q9UBT7 734 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 PPP2R3BQ9Y5P8 575 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 KIAA0100Q14667 2235 aaKnown RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 SHBGP04278 402 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 TROVE2P10155 538 aaKnown RBP eCLIP16.82■□□□□ 0.28
SYNM-201ENST00000328642 GHRP10912 638 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 MARSP56192 900 aaKnown RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 SNRPFP62306 86 aaKnown RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 LRRC31Q6UY01 552 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 SLC9A9Q8IVB4 645 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 RBPJLQ9UBG7 517 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 TMEM120BA0PK00 339 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 BTBD19C9JJ37 291 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 GTF2A1P52655 376 aaPredicted RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 PTENP60484 403 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 RYBPQ8N488 228 aaPredicted RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 KLHL29Q96CT2 875 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 TMEM176AQ96HP8 235 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 KLC2Q9H0B6 622 aa16.82■□□□□ 0.28
SYNM-201ENST00000328642 MARCOQ9UEW3 520 aaPredicted RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 XPO7Q9UIA9 1087 aaKnown RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 COL16A1Q07092 1604 aaPredicted RBP16.82■□□□□ 0.28
SYNM-201ENST00000328642 E5RJQ4 531 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 PLA2G6O60733 806 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 BANF1O75531 89 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 ZNF200P98182 395 aaPredicted RBP16.81■□□□□ 0.28
SYNM-201ENST00000328642 MFSD14CQ5VZR4 134 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 IL31Q6EBC2 164 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 MORC4Q8TE76 937 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 AENQ8WTP8 325 aaKnown RBP16.81■□□□□ 0.28
SYNM-201ENST00000328642 FAM172AQ8WUF8 416 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 DEPDC1BQ8WUY9 529 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 EDEM1Q92611 657 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 VPS11Q9H270 941 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 TSR3Q9UJK0 312 aaKnown RBP16.81■□□□□ 0.28
SYNM-201ENST00000328642 MYH1P12882 1939 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 MAP2K7O14733 419 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 EIF3HO15372 352 aaKnown RBP eCLIP16.81■□□□□ 0.28
SYNM-201ENST00000328642 GRIN3BO60391 1043 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 ARF4P18085 180 aaPredicted RBP16.81■□□□□ 0.28
SYNM-201ENST00000328642 HELQQ8TDG4 1101 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 GPR20Q99678 358 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 R3HDMLQ9H3Y0 253 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 FGFR1OP2Q9NVK5 253 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 CACNA1SQ13698 1873 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 EIF4E1BA6NMX2 242 aaKnown RBP16.81■□□□□ 0.28
SYNM-201ENST00000328642 RECQL4O94761 1208 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 CCDC130P13994 396 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 GPD1P21695 349 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 TGS1Q96RS0 853 aaKnown RBP16.81■□□□□ 0.28
SYNM-201ENST00000328642 ACO2Q99798 780 aaKnown RBP16.81■□□□□ 0.28
SYNM-201ENST00000328642 TINF2Q9BSI4 451 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 PABPC3Q9H361 631 aaKnown RBP16.81■□□□□ 0.28
SYNM-201ENST00000328642 MYH11P35749 1972 aa16.81■□□□□ 0.28
SYNM-201ENST00000328642 MAFO75444 373 aaPredicted RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 IL18RAPO95256 599 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 SYF2O95926 243 aaKnown RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 NCAM1P13591 858 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 ZNF484Q5JVG2 852 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 RFX8Q6ZV50 586 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 RAET1EQ8TD07 263 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 PDCD6IPQ8WUM4 868 aaKnown RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 NSMCE1Q8WV22 266 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 ATP2A3Q93084 1043 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 RGS17Q9UGC6 210 aaPredicted RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 KAT6AQ92794 2004 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 NHSL1Q5SYE7 1610 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 DFFAO00273 331 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 O00370 1275 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 C2CD2LO14523 706 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 CTCFP49711 727 aaPredicted RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 RABGGTBP53611 331 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 SREK1Q8WXA9 508 aaKnown RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 LPPQ93052 612 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 PPP1R36Q96LQ0 422 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.8■□□□□ 0.28
SYNM-201ENST00000328642 A0A0A6YYK5 440 aaPredicted RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 RPSAP08865 295 aaKnown RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 ITIH2P19823 946 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 OR1G1P47890 313 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms