RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RRAGCQ9HB90 399 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 NEU2Q9Y3R4 380 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 AP1G2O75843 785 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 RSPH10BP0C881 870 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 HDAC4P56524 1084 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CELF3Q5SZQ8 465 aaKnown RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CCNI2Q6ZMN8 369 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CERS5Q8N5B7 392 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 OR6P1Q8NGX9 317 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 ACTRT1Q8TDG2 376 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 SLC13A4Q9UKG4 626 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 AAR2Q9Y312 384 aaKnown RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 NID2Q14112 1375 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 PSMD10O75832 226 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 COILP38432 576 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 GEMIN4P57678 1058 aaKnown RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 AARS2Q5JTZ9 985 aaKnown RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 TAS2R42Q7RTR8 314 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CBWD1Q9BRT8 395 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 MTMR12Q9C0I1 747 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 PORCNQ9H237 461 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 AVENQ9NQS1 362 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 PROSCO94903 275 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 NCF2P19878 526 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 PTPN11Q06124 597 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 DCAF6Q58WW2 860 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CHSY1Q86X52 802 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 TFB1MQ8WVM0 346 aaKnown RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 FBXO44Q9H4M3 255 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 TRPC7Q9HCX4 862 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 XPO7Q9UIA9 1087 aaKnown RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 FAF1Q9UNN5 650 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 ADM5C9JUS6 153 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 CHMP6Q96FZ7 201 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 GLIS2Q9BZE0 524 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 GOLPH3Q9H4A6 298 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 SLC30A1Q9Y6M5 507 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 NRXN3Q9Y4C0 1643 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 A0A087WZ62 844 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 EIF3HO15372 352 aaKnown RBP eCLIP11.92□□□□□ -0.55e-6■■■□□ 14.9
COL4A5-201ENST00000328300 HAUS5O94927 633 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 NCAM1P13591 858 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 SDE2Q6IQ49 451 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 SLC9A9Q8IVB4 645 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 HERC6Q8IVU3 1022 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 ABRAQ8N0Z2 381 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 SPATA18Q8TC71 538 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 UCMAQ8WVF2 138 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 MRPS31Q92665 395 aaKnown RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 HINFPQ9BQA5 517 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 FDXACB1Q9BRP7 624 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 KIFC3Q9BVG8 833 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 FOXN3O00409 490 aaPredicted RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 GNGT2O14610 69 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 ABCE1P61221 599 aaKnown RBP11.92□□□□□ -0.5
COL4A5-201ENST00000328300 E2F4Q16254 413 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 UNC93AQ86WB7 457 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 APBA2Q99767 749 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 LRRC1Q9BTT6 524 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 GPRC5CQ9NQ84 441 aa11.92□□□□□ -0.5
COL4A5-201ENST00000328300 RGS4P49798 205 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 ARFIP2P53365 341 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 SLC12A3P55017 1021 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 IMPG1Q17R60 797 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 XPNPEP3Q9NQH7 507 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 TRPM5Q9NZQ8 1165 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 CST8O60676 142 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 HIST1H2AGP0C0S8 130 aaPredicted RBP11.91□□□□□ -0.5
COL4A5-201ENST00000328300 HIST1H2ADP20671 130 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 TGM2P21980 687 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 ZNF200P98182 395 aaPredicted RBP11.91□□□□□ -0.5
COL4A5-201ENST00000328300 C10orf120Q5SQS8 335 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 HIST1H2AHQ96KK5 128 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 TINF2Q9BSI4 451 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 MUC3BQ9H195 1237 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 FAM124BQ9H5Z6 455 aaPredicted RBP11.91□□□□□ -0.5
COL4A5-201ENST00000328300 RAB6BQ9NRW1 208 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 LTN1O94822 1766 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 CASZ1Q86V15 1759 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 AKAP3O75969 853 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 RBP3P10745 1247 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 DNAJB2P25686 324 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 ARHGEF7Q14155 803 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 TMCO4Q5TGY1 634 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 UGT3A1Q6NUS8 523 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 MTBPQ96DY7 904 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 HMX1Q9NP08 348 aaPredicted RBP11.91□□□□□ -0.5
COL4A5-201ENST00000328300 ARHGEF38Q9NXL2 777 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 F5H5T6 163 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 FSCN1Q16658 493 aaKnown RBP11.91□□□□□ -0.5
COL4A5-201ENST00000328300 KIF19Q2TAC6 998 aa11.91□□□□□ -0.5
COL4A5-201ENST00000328300 ACBD5Q5T8D3 534 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms