RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 HINFPQ9BQA5 517 aa19.03■□□□□ 0.64
PTPMT1-201ENST00000326656 SLC46A2Q9BY10 475 aa19.03■□□□□ 0.64
PTPMT1-201ENST00000326656 TRIM9Q9C026 710 aa19.03■□□□□ 0.64
PTPMT1-201ENST00000326656 MAGEF1Q9HAY2 307 aa19.03■□□□□ 0.64
PTPMT1-201ENST00000326656 PDE11AQ9HCR9 933 aa19.03■□□□□ 0.64
PTPMT1-201ENST00000326656 DENND4CQ5VZ89 1909 aa19.03■□□□□ 0.64
PTPMT1-201ENST00000326656 CEP250Q9BV73 2442 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 SPECC1L-ADORA2AF8WAN1 911 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 GABRDO14764 452 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 EIF3DO15371 548 aaKnown RBP eCLIP19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 CUTAO60888 179 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 PRPF6O94906 941 aaKnown RBP19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 PAPSS2O95340 614 aaPredicted RBP19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 TMEM191BP0C7N4 346 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 HMGA1P17096 107 aaKnown RBP19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 PCSK1P29120 753 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 NLRP12P59046 1061 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 SNRPFP62306 86 aaKnown RBP19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 MYO1EQ12965 1108 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 DUOXA2Q1HG44 320 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 KIAA2013Q8IYS2 634 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 CMTM8Q8IZV2 173 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 ZSWIM2Q8NEG5 633 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 GIPC2Q8TF65 315 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 FUBP3Q96I24 572 aaKnown RBP eCLIP19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 ANKRD36BP1Q96IX9 119 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 PCIF1Q9H4Z3 704 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 INTS13Q9NVM9 706 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 DDX43Q9NXZ2 648 aaKnown RBP19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 UXTQ9UBK9 157 aaPredicted RBP19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 L1RE1Q9UN81 338 aa19.02■□□□□ 0.64
PTPMT1-201ENST00000326656 GOLGA8IPA6NC78 632 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 GOLGA8JA6NMD2 632 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 SLC38A8A6NNN8 435 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 PRPF40AO75400 957 aaKnown RBP19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 CTHP32929 405 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 AVPR1AP37288 418 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 ITPRIPL2Q3MIP1 535 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 CFAP221Q4G0U5 840 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 INTS6LQ5JSJ4 861 aaKnown RBP19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 TSSK4Q6SA08 328 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 LIMS2Q7Z4I7 341 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 TMEM150AQ86TG1 271 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 MON1AQ86VX9 555 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 ZNF507Q8TCN5 953 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 TRMT2BQ96GJ1 504 aaKnown RBP19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 MYRFLQ96LU7 910 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 CEP295NLQ96MC4 621 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 FGFBP2Q9BYJ0 223 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 KIF9Q9HAQ2 790 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 TMLHEQ9NVH6 421 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 NCDNQ9UBB6 729 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 SIX4Q9UIU6 781 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 SNX9Q9Y5X1 595 aa19.01■□□□□ 0.63
PTPMT1-201ENST00000326656 PRAMEF12O95522 483 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 TNNC2P02585 160 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 KRT19P08727 400 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 FAM163BP0C2L3 166 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 SDHBP21912 280 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 HOXA6P31267 233 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 CNR2P34972 360 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 CYP4F8P98187 520 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 AMPD2Q01433 879 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 BFSP1Q12934 665 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 ZNF268Q14587 947 aaPredicted RBP19■□□□□ 0.63
PTPMT1-201ENST00000326656 ATL3Q6DD88 541 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 EPM2AIP1Q7L775 607 aaPredicted RBP19■□□□□ 0.63
PTPMT1-201ENST00000326656 GPIHBP1Q8IV16 184 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 MRPS31Q92665 395 aaKnown RBP19■□□□□ 0.63
PTPMT1-201ENST00000326656 PKMYT1Q99640 499 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 C7orf25Q9BPX7 421 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 FAM83CQ9BQN1 747 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 PI4K2AQ9BTU6 479 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 MTMR12Q9C0I1 747 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 TDP1Q9NUW8 608 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 GTSE1Q9NYZ3 720 aa19■□□□□ 0.63
PTPMT1-201ENST00000326656 TFIP11Q9UBB9 837 aaKnown RBP19■□□□□ 0.63
PTPMT1-201ENST00000326656 TULP1O00294 542 aaPredicted RBP18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 NOL4O94818 638 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 MAGEA11P43364 429 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 PUM1Q14671 1186 aaKnown RBP eCLIP18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 MAPRE1Q15691 268 aaKnown RBP18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 SOWAHAQ2M3V2 549 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 FAM171BQ6P995 826 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 WDR49Q8IV35 697 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 ADGRF2Q8IZF7 708 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 DCLK2Q8N568 766 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 HPDLQ96IR7 371 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 ZFYVE19Q96K21 471 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 GKN1Q9NS71 199 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 HSPBP1Q9NZL4 362 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 CGNQ9P2M7 1197 aaKnown RBP18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 GTF3C4Q9UKN8 822 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 SMG5Q9UPR3 1016 aaKnown RBP18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 DCHS1Q96JQ0 3298 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 ZNF638Q14966 1978 aaKnown RBP18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 UBE4BO95155 1302 aa18.99■□□□□ 0.63
PTPMT1-201ENST00000326656 CYP2F1P24903 491 aa18.98■□□□□ 0.63
PTPMT1-201ENST00000326656 HOXD13P35453 343 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms