RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 WDR83Q9BRX9 315 aaKnown RBP20.9■□□□□ 0.94
CRLF3-201ENST00000324238 GCLCP48506 637 aaPredicted RBP20.89■□□□□ 0.94
CRLF3-201ENST00000324238 OTUD4Q01804 1114 aaKnown RBP20.89■□□□□ 0.94
CRLF3-201ENST00000324238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.89■□□□□ 0.94
CRLF3-201ENST00000324238 RCOR2Q8IZ40 523 aa20.89■□□□□ 0.94
CRLF3-201ENST00000324238 JOSD2Q8TAC2 188 aa20.89■□□□□ 0.94
CRLF3-201ENST00000324238 TCP10LQ8TDR4 215 aa20.89■□□□□ 0.94
CRLF3-201ENST00000324238 PYROXD1Q8WU10 500 aa20.89■□□□□ 0.94
CRLF3-201ENST00000324238 TIPINQ9BVW5 301 aa20.89■□□□□ 0.94
CRLF3-201ENST00000324238 GINM1Q9NU53 330 aa20.89■□□□□ 0.94
CRLF3-201ENST00000324238 TXLNGQ9NUQ3 528 aa20.89■□□□□ 0.94
CRLF3-201ENST00000324238 IP6K2Q9UHH9 426 aa20.89■□□□□ 0.94
CRLF3-201ENST00000324238 CFAP69A5D8W1 941 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 CST8O60676 142 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 MMP8P22894 467 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 IL1R2P27930 398 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 RFC1P35251 1148 aaPredicted RBP20.89■□□□□ 0.93
CRLF3-201ENST00000324238 CETN2P41208 172 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 RAP1GAPP47736 663 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 NLRP9Q7RTR0 991 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 PHF13Q86YI8 300 aaPredicted RBP20.89■□□□□ 0.93
CRLF3-201ENST00000324238 CCHCR1Q8TD31 782 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 C10orf82Q8WW14 230 aa20.89■□□□□ 0.93
CRLF3-201ENST00000324238 FBXO6Q9NRD1 293 aaPredicted RBP20.89■□□□□ 0.93
CRLF3-201ENST00000324238 NXF1Q9UBU9 619 aaKnown RBP20.89■□□□□ 0.93
CRLF3-201ENST00000324238 hCG_1818297A0A087WSY0 165 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 CD19P15391 556 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 GMPSP49915 693 aaPredicted RBP20.88■□□□□ 0.93
CRLF3-201ENST00000324238 VCPP55072 806 aaKnown RBP20.88■□□□□ 0.93
CRLF3-201ENST00000324238 PDK4Q16654 411 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 HIF1AQ16665 826 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 ZNF677Q86XU0 584 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 CCDC125Q86Z20 511 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 KIAA0319LQ8IZA0 1049 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 WDTC1Q8N5D0 677 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 AGBL3Q8NEM8 1001 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 PPP1R16BQ96T49 567 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 PDLIM7Q9NR12 457 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 METTL5Q9NRN9 209 aaKnown RBP20.88■□□□□ 0.93
CRLF3-201ENST00000324238 CHMP2BQ9UQN3 213 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 STARD13Q9Y3M8 1113 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 MYH9P35579 1960 aaKnown RBP20.88■□□□□ 0.93
CRLF3-201ENST00000324238 PEX11AO75192 247 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 AVILO75366 819 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 PSAPP07602 524 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 NEFHP12036 1026 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 RXRBP28702 533 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 RAB6CQ53S08 254 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 CENPUQ71F23 418 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 FAM71DQ8N9W8 422 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 FBXO36Q8NEA4 188 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 MCPH1Q8NEM0 835 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 RAB6CQ9H0N0 254 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 DENND2DQ9H6A0 471 aaPredicted RBP20.88■□□□□ 0.93
CRLF3-201ENST00000324238 ZFP69BQ9UJL9 534 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 SRGAP2CP0DJJ0 459 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 IGDCC3Q8IVU1 814 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 UNC45BQ8IWX7 931 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 NSUN6Q8TEA1 469 aaKnown RBP20.88■□□□□ 0.93
CRLF3-201ENST00000324238 SCINQ9Y6U3 715 aa20.88■□□□□ 0.93
CRLF3-201ENST00000324238 TYROBPO43914 113 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 ZC3H11AO75152 810 aaKnown RBP eCLIP20.87■□□□□ 0.93
CRLF3-201ENST00000324238 CDKN2BP42772 138 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 BACE1P56817 501 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 BASP1P80723 227 aaKnown RBP20.87■□□□□ 0.93
CRLF3-201ENST00000324238 OASLQ15646 514 aaKnown RBP20.87■□□□□ 0.93
CRLF3-201ENST00000324238 PAFAH2Q99487 392 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 PLCD4Q9BRC7 762 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 TRIM6Q9C030 488 aaPredicted RBP20.87■□□□□ 0.93
CRLF3-201ENST00000324238 PICK1Q9NRD5 415 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 KANSL3Q9P2N6 904 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 RABGEF1Q9UJ41 708 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 ALOX15BO15296 676 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 CSDE1O75534 798 aaKnown RBP20.87■□□□□ 0.93
CRLF3-201ENST00000324238 FAM155BO75949 473 aa20.87■□□□□ 0.93
CRLF3-201ENST00000324238 YARSP54577 528 aaKnown RBP20.87■□□□□ 0.93
CRLF3-201ENST00000324238 TFAMQ00059 246 aaKnown RBP20.87■□□□□ 0.93
CRLF3-201ENST00000324238 TMEM63AO94886 807 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 GJB1P08034 283 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 CPA2P48052 419 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 CDH8P55286 799 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 TFDP3Q5H9I0 405 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 NPNTQ6UXI9 565 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 TTC7BQ86TV6 843 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 ZC3H18Q86VM9 953 aaKnown RBP20.86■□□□□ 0.93
CRLF3-201ENST00000324238 ARFGAP1Q8N6T3 406 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 CPT1BQ92523 772 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 HSPH1Q92598 858 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 RBM41Q96IZ5 413 aaKnown RBP20.86■□□□□ 0.93
CRLF3-201ENST00000324238 R3HDMLQ9H3Y0 253 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 CISHQ9NSE2 258 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 PSMC3IPQ9P2W1 217 aaPredicted RBP20.86■□□□□ 0.93
CRLF3-201ENST00000324238 ACTL7BQ9Y614 415 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 PSMA2P25787 234 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 ALDH3A1P30838 453 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 C1QBPQ07021 282 aaKnown RBP20.86■□□□□ 0.93
CRLF3-201ENST00000324238 NR1H3Q13133 447 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 ACVR2BQ13705 512 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 DENND1BQ6P3S1 775 aa20.86■□□□□ 0.93
CRLF3-201ENST00000324238 TTC17Q96AE7 1141 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms