RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TTC30AQ86WT1 665 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 FEZF2Q8TBJ5 459 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 ARVCFO00192 962 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 ZNF623O75123 536 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 CALB1P05937 261 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 TUBB4BP68371 445 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 PDCLQ13371 301 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 ARHGEF6Q15052 776 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 LCLAT1Q6UWP7 414 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 OSTM1Q86WC4 334 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 KLHL7Q8IXQ5 586 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 WNT8AQ9H1J5 351 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 CEP83Q9Y592 693 aa19.5■□□□□ 0.71
USP39-201ENST00000323701 A0A0U1RQG5 324 aaPredicted RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 TCRBV7S2A1N4TA0A589 114 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 ZSCAN5CA6NGD5 496 aaPredicted RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 GOLGA8SH3BPF8 625 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 XPOTO43592 962 aaKnown RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 POMCP01189 267 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 THP07101 528 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 GOLGA7BQ2TAP0 167 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 SMYD5Q6GMV2 418 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 CC2D1AQ6P1N0 951 aaPredicted RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 XYLT1Q86Y38 959 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 LINC01599Q8WXQ3 324 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 PIWIL1Q96J94 861 aaKnown RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 ZNF560Q96MR9 790 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 DEFB118Q96PH6 123 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 TSPAN18Q96SJ8 248 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 TRAIPQ9BWF2 469 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 MRPL47Q9HD33 250 aaKnown RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 TTC7AQ9ULT0 858 aaPredicted RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 PTPN22Q9Y2R2 807 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 CASTOR2A6NHX0 329 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 A8MXQ7 604 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 GABBR2O75899 941 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 CTNNA2P26232 953 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 PKDCCQ504Y2 493 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 DNAJC24Q6P3W2 148 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 GSPT2Q8IYD1 628 aaKnown RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 UBL4BQ8N7F7 174 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 C3orf20Q8ND61 904 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 JOSD2Q8TAC2 188 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 DDX47Q9H0S4 455 aaKnown RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 PAK6Q9NQU5 681 aaPredicted RBP19.49■□□□□ 0.71
USP39-201ENST00000323701 GIT1Q9Y2X7 761 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 SCINQ9Y6U3 715 aa19.49■□□□□ 0.71
USP39-201ENST00000323701 F8VP50 259 aa19.48■□□□□ 0.71
USP39-201ENST00000323701 KRIT1O00522 736 aa19.48■□□□□ 0.71
USP39-201ENST00000323701 GLI1P08151 1106 aa19.48■□□□□ 0.71
USP39-201ENST00000323701 CCDC130P13994 396 aa19.48■□□□□ 0.71
USP39-201ENST00000323701 RFC1P35251 1148 aaPredicted RBP19.48■□□□□ 0.71
USP39-201ENST00000323701 GNL1P36915 607 aaPredicted RBP19.48■□□□□ 0.71
USP39-201ENST00000323701 CDK7P50613 346 aa19.48■□□□□ 0.71
USP39-201ENST00000323701 APPL2Q8NEU8 664 aa19.48■□□□□ 0.71
USP39-201ENST00000323701 C18orf8Q96DM3 657 aa19.48■□□□□ 0.71
USP39-201ENST00000323701 FAM124BQ9H5Z6 455 aaPredicted RBP19.48■□□□□ 0.71
USP39-201ENST00000323701 USTQ9Y2C2 406 aa19.48■□□□□ 0.71
USP39-201ENST00000323701 KBTBD13C9JR72 458 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 ATP2C2O75185 946 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 ZRANB2O95218 330 aaKnown RBP eCLIP19.47■□□□□ 0.71
USP39-201ENST00000323701 PNPLA4P41247 253 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 PSMC1P62191 440 aaKnown RBP19.47■□□□□ 0.71
USP39-201ENST00000323701 GPNMBQ14956 572 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 TRADDQ15628 312 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 SV2CQ496J9 727 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 WSCD1Q658N2 575 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 PPP1R2P3Q6NXS1 205 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 PMF1Q6P1K2 205 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 WDR93Q6P2C0 686 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 ZNF598Q86UK7 904 aaKnown RBP19.47■□□□□ 0.71
USP39-201ENST00000323701 DDX27Q96GQ7 796 aaKnown RBP19.47■□□□□ 0.71
USP39-201ENST00000323701 HERPUD2Q9BSE4 406 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 TARSL2A2RTX5 802 aaKnown RBP19.47■□□□□ 0.71
USP39-201ENST00000323701 CCDC66A2RUB6 948 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 CCDC151A5D8V7 595 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 RAD51CO43502 376 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 ACAT1P24752 427 aaKnown RBP19.47■□□□□ 0.71
USP39-201ENST00000323701 RGS7P49802 495 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 LONRF2Q1L5Z9 754 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 ATP13A4Q4VNC1 1196 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 C8orf74Q6P047 294 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 ADGRF2Q8IZF7 708 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 TTC39CQ8N584 583 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 EMC1Q8N766 993 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 RSAD1Q9HA92 442 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 ST7Q9NRC1 585 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 KIAA1257Q9ULG3 409 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 INPP5FQ9Y2H2 1132 aa19.47■□□□□ 0.71
USP39-201ENST00000323701 TIMM13Q9Y5L4 95 aaPredicted RBP19.47■□□□□ 0.71
USP39-201ENST00000323701 F8W810 466 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 PODXLO00592 558 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 CYB561D2O14569 222 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 PAN2Q504Q3 1202 aaKnown RBP19.46■□□□□ 0.71
USP39-201ENST00000323701 KIAA0319Q5VV43 1072 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 ANKS1BQ7Z6G8 1248 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 UNC93AQ86WB7 457 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 ECHDC2Q86YB7 292 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 ESYT3A0FGR9 886 aa19.46■□□□□ 0.71
USP39-201ENST00000323701 E5RJQ4 531 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms