RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MMEL1Q495T6 779 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 MOB2Q70IA6 237 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 PRELID2Q8N945 189 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 CPB2Q96IY4 423 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 Q9H521 79 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 EGFRP00533 1210 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 RFX1P22670 979 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 TBXAS1P24557 533 aaPredicted RBP15.98■□□□□ 0.15
VARS2-201ENST00000321897 MED21Q13503 144 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 FEZF2Q8TBJ5 459 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 TSSK1BQ9BXA7 367 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 ARMCX1Q9P291 453 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 COG5Q9UP83 839 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 MYH8P13535 1937 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 ARL4AP40617 200 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 CCDC14Q49A88 953 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 TWF2Q6IBS0 349 aaKnown RBP15.98■□□□□ 0.15
VARS2-201ENST00000321897 KRT80Q6KB66 452 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 RWDD4Q6NW29 188 aaKnown RBP15.98■□□□□ 0.15
VARS2-201ENST00000321897 MREGQ8N565 214 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 A1CFQ9NQ94 594 aaKnown RBP15.98■□□□□ 0.15
VARS2-201ENST00000321897 KCND2Q9NZV8 630 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 NAALADL1Q9UQQ1 740 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 VWA5AO00534 786 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 EXTL3O43909 919 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 OATP04181 439 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 CXCL8P10145 99 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 KRT4P19013 534 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 CNGA2Q16280 664 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 DEPDC1BQ8WUY9 529 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 COPS5Q92905 334 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 TRIM56Q9BRZ2 755 aaKnown RBP15.97■□□□□ 0.15
VARS2-201ENST00000321897 SUDS3Q9H7L9 328 aaPredicted RBP15.97■□□□□ 0.15
VARS2-201ENST00000321897 DPPA5A6NC42 116 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 IREB2P48200 963 aaKnown RBP15.97■□□□□ 0.15
VARS2-201ENST00000321897 RPL7AP62424 266 aaKnown RBP15.97■□□□□ 0.15
VARS2-201ENST00000321897 NBPF20Q3BBV1 942 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 NPTXRO95502 500 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 CALB2P22676 271 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 AP1B1Q10567 949 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 STAT4Q14765 748 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 MFSD7Q6UXD7 560 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 IZUMO2Q6UXV1 221 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 OR5B17Q8NGF7 314 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 STK32AQ8WU08 396 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 RNPEPL1Q9HAU8 725 aa15.97■□□□□ 0.15
VARS2-201ENST00000321897 LRRC37A3O60309 1634 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 CTSHP09668 335 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 ITIH2P19823 946 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 SSTR1P30872 391 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 PTDSS1P48651 473 aaKnown RBP15.96■□□□□ 0.15
VARS2-201ENST00000321897 ACAP3Q96P50 834 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 NACA2Q9H009 215 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.96■□□□□ 0.15
VARS2-201ENST00000321897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.96■□□□□ 0.15
VARS2-201ENST00000321897 NDC80O14777 642 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 ATP9BO43861 1147 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 CYP3A4P08684 503 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 HIRAP54198 1017 aaPredicted RBP15.96■□□□□ 0.15
VARS2-201ENST00000321897 ZBTB41Q5SVQ8 909 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 ATF7IP2Q5U623 682 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 ANO5Q75V66 913 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 CRLF3Q8IUI8 442 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 ZNF606Q8WXB4 792 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 SCG3Q8WXD2 468 aaKnown RBP15.96■□□□□ 0.15
VARS2-201ENST00000321897 KREMEN1Q96MU8 473 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 MMP19Q99542 508 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 KIAA1683Q9H0B3 1180 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 DCLRE1BQ9H816 532 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 CISHQ9NSE2 258 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 ANKEF1Q9NU02 776 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 POLIQ9UNA4 740 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 TNFSF9P41273 254 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 AUHQ13825 339 aaKnown RBP15.96■□□□□ 0.15
VARS2-201ENST00000321897 C11orf63Q6NUN7 778 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 ACTL9Q8TC94 416 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 EXT2Q93063 718 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 LRGUKQ96M69 825 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 DDX18Q9NVP1 670 aaKnown RBP15.96■□□□□ 0.15
VARS2-201ENST00000321897 XPO7Q9UIA9 1087 aaKnown RBP15.96■□□□□ 0.15
VARS2-201ENST00000321897 DNPEPQ9ULA0 475 aa15.96■□□□□ 0.15
VARS2-201ENST00000321897 SNED1Q8TER0 1413 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 CCNE2O96020 404 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 SLC12A2P55011 1212 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 MRPS9P82933 396 aaKnown RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 ASPHQ12797 758 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 KIZQ2M2Z5 673 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 ARHGAP22Q7Z5H3 698 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 CXorf38Q8TB03 319 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 CCDC97Q96F63 343 aaPredicted RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 WNK4Q96J92 1243 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 DYNC1LI2O43237 492 aaPredicted RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 CHKAP35790 457 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 PAN2Q504Q3 1202 aaKnown RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 ARID3BQ8IVW6 561 aaPredicted RBP15.95■□□□□ 0.14
VARS2-201ENST00000321897 MCOLN2Q8IZK6 566 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 SIX6OS1Q8N1H7 587 aa15.95■□□□□ 0.14
VARS2-201ENST00000321897 RYBPQ8N488 228 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms