RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PLA2G4FQ68DD2 849 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 SPOPLQ6IQ16 392 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 OTOAQ7RTW8 1153 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 FBXO36Q8NEA4 188 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 TTC25Q96NG3 672 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 RAB6BQ9NRW1 208 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 XPO7Q9UIA9 1087 aaKnown RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 ABT1Q9ULW3 272 aaKnown RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 RIC1Q4ADV7 1423 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 A6NJR5 290 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF189O75820 626 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 GGPS1O95749 300 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 WEE2P0C1S8 567 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 SESN2P58004 480 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF543Q08ER8 600 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 RIPK1Q13546 671 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 CCNYL1Q8N7R7 359 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 LRRC57Q8N9N7 239 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 DEPTORQ8TB45 409 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 CNKSR2Q8WXI2 1034 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 L3MBTL3Q96JM7 780 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 PRPF18Q99633 342 aaKnown RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 MECRQ9BV79 373 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 SLC9A2Q9UBY0 812 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 WARS2Q9UGM6 360 aaKnown RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 TJP1Q07157 1748 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 C5orf60A6NFR6 353 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 CST8O60676 142 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 ATP6V1G1O75348 118 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 EYA4O95677 639 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 CLPTM1O96005 669 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 GSTA2P09210 222 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 ABL2P42684 1182 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 NEK3P51956 506 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 STAT2P52630 851 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 SOX10P56693 466 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 STX3Q13277 289 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 CYLC2Q14093 348 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 ASTE1Q2TB18 679 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 KLHL38Q2WGJ6 581 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 STRIP1Q5VSL9 837 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 SYDE2Q5VT97 1194 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 KRT39Q6A163 491 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 NOP9Q86U38 636 aaKnown RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 MAB21L3Q8N8X9 362 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 FBXL13Q8NEE6 735 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 TRPM4Q8TD43 1214 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 TAS1R2Q8TE23 839 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 USP13Q92995 863 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 THAP11Q96EK4 314 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 CCT7Q99832 543 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 PAGR1Q9BTK6 254 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 GLIS2Q9BZE0 524 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 MYOZ2Q9NPC6 264 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 DNPEPQ9ULA0 475 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 DTNAQ9Y4J8 743 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 ADM5C9JUS6 153 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 F5H6K3 240 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 PEX11AO75192 247 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 GPC4O75487 556 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 ECE1P42892 770 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 ATP1A4Q13733 1029 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 WASHC2DQ5SRD0 308 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 CDC42EP5Q6NZY7 148 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 ZDHHC24Q6UX98 284 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 POLNQ7Z5Q5 900 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 PTAR1Q7Z6K3 402 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 MAGEC3Q8TD91 643 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 MRPL1Q9BYD6 325 aaKnown RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 KIAA1586Q9HCI6 787 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 SLC17A7Q9P2U7 560 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 CCPG1Q9ULG6 757 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 DOLKQ9UPQ8 538 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 SCINQ9Y6U3 715 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 V9GYQ6 96 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 E9PBE3 544 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 KLHL41O60662 606 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 FOSP01100 380 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 EIF3EP60228 445 aaKnown RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 OTUD4Q01804 1114 aaKnown RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 PEX6Q13608 980 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 MPP2Q14168 576 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 C16orf72Q14CZ0 275 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 OASLQ15646 514 aaKnown RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 SHROOM1Q2M3G4 852 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 OR6B2Q6IFH4 312 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 RIPOR1Q6ZS17 1223 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 TRIM67Q6ZTA4 783 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 NLRX1Q86UT6 975 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 DNAAF3Q8N9W5 541 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 GSTCDQ8NEC7 633 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 KAT6AQ92794 2004 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 HAS1Q92839 578 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 E2F7Q96AV8 911 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 EME1Q96AY2 570 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 UNKQ9C0B0 810 aaKnown RBP7.88□□□□□ -1.15
CDHR3-201ENST00000317716 TMEM206Q9H813 350 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 HACL1Q9UJ83 578 aa7.88□□□□□ -1.15
CDHR3-201ENST00000317716 FAM86B2P0C5J1 330 aa7.87□□□□□ -1.15
CDHR3-201ENST00000317716 CYP11B1P15538 503 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms