RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ZFYVE27Q5T4F4 411 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 TXNRD3NBQ6F5E7 133 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
RTN4-201ENST00000317610 C4orf50Q6ZRC1 276 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 ANKMY2Q8IV38 441 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 PPIL6Q8IXY8 311 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 BANPQ8N9N5 519 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 CGRRF1Q99675 332 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 TUBB6Q9BUF5 446 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 HAPLN2Q9GZV7 340 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 PGAP2Q9UHJ9 254 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 KCNG1Q9UIX4 513 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 ENTPD5O75356 428 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 BANF1O75531 89 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 LSM8O95777 96 aaKnown RBP20.08■□□□□ 0.81
RTN4-201ENST00000317610 TFDP1Q14186 410 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 PIGHQ14442 188 aaPredicted RBP20.08■□□□□ 0.81
RTN4-201ENST00000317610 EFTUD2Q15029 972 aaKnown RBP eCLIP20.08■□□□□ 0.814e-14■■■■■ 28.8
RTN4-201ENST00000317610 LMNTD2Q8IXW0 634 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 NAT8LQ8N9F0 302 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 SUPT20HQ8NEM7 779 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 AKT1S1Q96B36 256 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 MRRFQ96E11 262 aaKnown RBP20.08■□□□□ 0.81
RTN4-201ENST00000317610 MCEEQ96PE7 176 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 GMLQ99445 158 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 PAFAH2Q99487 392 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 WDR83Q9BRX9 315 aaKnown RBP20.08■□□□□ 0.81
RTN4-201ENST00000317610 CYP26B1Q9NR63 512 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 RBAKQ9NYW8 714 aaPredicted RBP20.08■□□□□ 0.81
RTN4-201ENST00000317610 ZNRF3Q9ULT6 936 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 EFR3BQ9Y2G0 817 aa20.08■□□□□ 0.81
RTN4-201ENST00000317610 C3orf70A6NLC5 250 aaPredicted RBP20.08■□□□□ 0.8
RTN4-201ENST00000317610 ARL4CP56559 192 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 TAP1Q03518 808 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 ARHGEF16Q5VV41 709 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 DNAJC24Q6P3W2 148 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 RFWD2Q8NHY2 731 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 TCP10LQ8TDR4 215 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 PYROXD1Q8WU10 500 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 CPT1BQ92523 772 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 HAUS1Q96CS2 278 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 PTCD3Q96EY7 689 aaKnown RBP20.08■□□□□ 0.8
RTN4-201ENST00000317610 CADM1Q9BY67 442 aaKnown RBP20.08■□□□□ 0.8
RTN4-201ENST00000317610 FRMD8P1Q9BZ68 369 aaPredicted RBP20.08■□□□□ 0.8
RTN4-201ENST00000317610 KIAA1217Q5T5P2 1943 aa20.08■□□□□ 0.8
RTN4-201ENST00000317610 CCDC22O60826 627 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 DNAJC6O75061 913 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 TSHRP16473 764 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 SSTR1P30872 391 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 CTCFP49711 727 aaPredicted RBP20.07■□□□□ 0.8
RTN4-201ENST00000317610 MRPS35P82673 323 aaKnown RBP20.07■□□□□ 0.8
RTN4-201ENST00000317610 MSS51Q4VC12 460 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 FNBP1LQ5T0N5 605 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 TRIM68Q6AZZ1 485 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 FAM83AQ86UY5 434 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 VSIG10LQ86VR7 867 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 DCAKDQ8WVC6 231 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 LRRD1A4D1F6 860 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 CLGNO14967 610 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 MAFGO15525 162 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 IFNB1P01574 187 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 PSAPP07602 524 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 KCNA2P16389 499 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 GAD2Q05329 585 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 ANKRD22Q5VYY1 191 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 NAIF1Q69YI7 327 aaPredicted RBP20.07■□□□□ 0.8
RTN4-201ENST00000317610 POLNQ7Z5Q5 900 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 ADAM33Q9BZ11 813 aa20.07■□□□□ 0.8
RTN4-201ENST00000317610 SEPT9Q9UHD8 586 aaPredicted RBP20.07■□□□□ 0.8
RTN4-201ENST00000317610 CNTNAP2Q9UHC6 1331 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 GOLGA8SH3BPF8 625 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 GOLGA8MH3BSY2 632 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 KIF3CO14782 793 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 DHRS4L1P0CG22 281 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 TSNAXIP1Q2TAA8 658 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 SLFN12LQ6IEE8 588 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 SWSAP1Q6NVH7 229 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 APLFQ8IW19 511 aaPredicted RBP20.06■□□□□ 0.8
RTN4-201ENST00000317610 DNAJC9Q8WXX5 260 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 BTBD10Q9BSF8 475 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 MANSC1Q9H8J5 431 aa20.06■□□□□ 0.8
RTN4-201ENST00000317610 TGDSO95455 350 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 LDHAP00338 332 aaKnown RBP20.05■□□□□ 0.8
RTN4-201ENST00000317610 CCND2P30279 289 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 PCK1P35558 622 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 PRKCEQ02156 737 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 SEPT7Q16181 437 aaKnown RBP20.05■□□□□ 0.8
RTN4-201ENST00000317610 DCUN1D2Q6PH85 259 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 C3orf62Q6ZUJ4 267 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 CHSY1Q86X52 802 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 ACSF2Q96CM8 615 aaPredicted RBP20.05■□□□□ 0.8
RTN4-201ENST00000317610 TRIM55Q9BYV6 548 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 SLC17A7Q9P2U7 560 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 STOML1Q9UBI4 398 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 H0Y3Z8 333 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 HAUS5O94927 633 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 PLCB3Q01970 1234 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 LBRQ14739 615 aaKnown RBP20.05■□□□□ 0.8
RTN4-201ENST00000317610 SGSM1Q2NKQ1 1148 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 KHDC1Q4VXA5 237 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms