RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 STAT1P42224 750 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 PSMC1P62191 440 aaKnown RBP13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 TSPY1Q01534 308 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 ROR1Q01973 937 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 GPR17Q13304 367 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 ADGRE1Q14246 886 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 ARID5BQ14865 1188 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 ZNF394Q53GI3 561 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 LILRA6Q6PI73 481 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 TMC6Q7Z403 805 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 ACOT1Q86TX2 421 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 DEFB123Q8N688 67 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 MYCBPAPQ8TBZ2 947 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 SPAG5Q96R06 1193 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 LPIN3Q9BQK8 851 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 ZSWIM1Q9BR11 485 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 EMILIN2Q9BXX0 1053 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 TMLHEQ9NVH6 421 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 GTF3C4Q9UKN8 822 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 MUC3AQ02505 3323 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 WDR27A2RRH5 827 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 CYP26A1O43174 497 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 CSPG5O95196 566 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 VNN2O95498 520 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 KRT5P13647 590 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 CASP14P31944 242 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 ZBED6P86452 979 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 MAPRE1Q15691 268 aaKnown RBP13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 NFE2Q16621 373 aaPredicted RBP13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 TPGS2Q68CL5 300 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 C12orf29Q8N999 325 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 ZNF461Q8TAF7 563 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 TFAP2BQ92481 460 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 MYLPFQ96A32 169 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 AIPL1Q9NZN9 384 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 KIAA1257Q9ULG3 409 aa13.46□□□□□ -0.25
CHMP2A-201ENST00000312547 COL4A4P53420 1690 aaPredicted RBP13.46□□□□□ -0.26
CHMP2A-201ENST00000312547 MTMR11A4FU01 709 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 LRRC53A6NM62 1247 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 CLASP2O75122 1294 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 GFPT2O94808 682 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 ADH1AP07327 375 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 VDRP11473 427 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 CPB1P15086 417 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 HNRNPH3P31942 346 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 USP8P40818 1118 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 DUSP6Q16828 381 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 SLC39A12Q504Y0 691 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 MDH1BQ5I0G3 518 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 PAQR9Q6ZVX9 377 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 IRF2BP2Q7Z5L9 587 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 PPFIBP1Q86W92 1011 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 FUKQ8N0W3 1084 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 SLC22A17Q8WUG5 538 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 CPLX3Q8WVH0 158 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 HEXIM2Q96MH2 286 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 B3GNT5Q9BYG0 378 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 DNAI2Q9GZS0 605 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 ABCB6Q9NP58 842 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 ACP6Q9NPH0 428 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 AFF4Q9UHB7 1163 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 MAFFQ9ULX9 164 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 LUC7L2Q9Y383 392 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 MTCH2Q9Y6C9 303 aa13.45□□□□□ -0.26
CHMP2A-201ENST00000312547 O00370 1275 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 TGM5O43548 720 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 MFAP3LO75121 409 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 CALCAP01258 141 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 CCDC130P13994 396 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 ATF2P15336 505 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 CYP11B1P15538 503 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 FERP16591 822 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 KLRC2P26717 231 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 CA8P35219 290 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 KRT9P35527 623 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 PRKCIP41743 596 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 CLCN4P51793 760 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 ARPP19P56211 112 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 BPIFB4P59827 614 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 PTK2Q05397 1052 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 KCNC3Q14003 757 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 SGO2Q562F6 1265 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 SLC47A2Q86VL8 602 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 FMNL3Q8IVF7 1028 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 GLYCTKQ8IVS8 523 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 ATAD1Q8NBU5 361 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms