RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 GSTCDQ8NEC7 633 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 LMO3Q8TAP4 145 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 TTC17Q96AE7 1141 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 RANBP17Q9H2T7 1088 aaKnown RBP18.94■□□□□ 0.62
SPSB4-201ENST00000310546 PTTG2Q9NZH5 202 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 EMSYQ7Z589 1322 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 C10orf71Q711Q0 1435 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 SOCS7O14512 581 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 FUT4P22083 530 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 RPA1P27694 616 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 GCLMP48507 274 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 SHKBP1Q8TBC3 707 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 FHDC1Q9C0D6 1143 aaPredicted RBP18.93■□□□□ 0.62
SPSB4-201ENST00000310546 JMJD4Q9H9V9 463 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 PPARGC1AQ9UBK2 798 aaKnown RBP18.93■□□□□ 0.62
SPSB4-201ENST00000310546 GTF3C4Q9UKN8 822 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 PNMA6FA0A0J9YX94 578 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 SPDYE16A6NNV3 312 aaPredicted RBP18.93■□□□□ 0.62
SPSB4-201ENST00000310546 TM7SF2O76062 418 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 CYP1A2P05177 515 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 GZMAP12544 262 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 UQCRBP14927 111 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 JAG1P78504 1218 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 PDK3Q15120 406 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 B3GNT6Q6ZMB0 384 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 ANKS1BQ7Z6G8 1248 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 PPM1KQ8N3J5 372 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 PHF12Q96QT6 1004 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 SGIP1Q9BQI5 828 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 UVRAGQ9P2Y5 699 aa18.93■□□□□ 0.62
SPSB4-201ENST00000310546 ARHGAP42A6NI28 874 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 ATP9BO43861 1147 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 EGFRP00533 1210 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 BMP3P12645 472 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 BGNP21810 368 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 SHMT1P34896 483 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 HIRAP54198 1017 aaPredicted RBP18.92■□□□□ 0.62
SPSB4-201ENST00000310546 AGPAT3Q9NRZ7 376 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 RABGAP1Q9Y3P9 1069 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 CENPFP49454 3210 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 VILLO15195 856 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 OATP04181 439 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 ETS1P14921 441 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 GABPAQ06546 454 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 NCOA4Q13772 614 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 C2CD6Q53TS8 623 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 HIPK4Q8NE63 616 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 VPS11Q9H270 941 aa18.92■□□□□ 0.62
SPSB4-201ENST00000310546 PEX2P28328 305 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 PTGER2P43116 358 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 CYLC2Q14093 348 aaPredicted RBP18.91■□□□□ 0.62
SPSB4-201ENST00000310546 DHDDSQ86SQ9 333 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 SLFN12Q8IYM2 578 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.91■□□□□ 0.62
SPSB4-201ENST00000310546 SLC26A7Q8TE54 656 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 PCIF1Q9H4Z3 704 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 SMYD3Q9H7B4 428 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 ARHGEF38Q9NXL2 777 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 NOCTQ9UK39 431 aaKnown RBP18.91■□□□□ 0.62
SPSB4-201ENST00000310546 ZNF711Q9Y462 761 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 CDK4P11802 303 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 CHN2P52757 468 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 FMO1Q01740 532 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 SPIRE1Q08AE8 756 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 CETN1Q12798 172 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 IKQ13123 557 aaPredicted RBP18.91■□□□□ 0.62
SPSB4-201ENST00000310546 HNRNPDQ14103 355 aaKnown RBP18.91■□□□□ 0.62
SPSB4-201ENST00000310546 KLHDC10Q6PID8 442 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 OLFML3Q9NRN5 406 aa18.91■□□□□ 0.62
SPSB4-201ENST00000310546 TDRKHQ9Y2W6 561 aaKnown RBP18.91■□□□□ 0.62
SPSB4-201ENST00000310546 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 ATP6V1B1P15313 513 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 SSTR1P30872 391 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 GEMIN4P57678 1058 aaKnown RBP18.9■□□□□ 0.62
SPSB4-201ENST00000310546 COG7P83436 770 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 PLOD1Q02809 727 aaPredicted RBP18.9■□□□□ 0.62
SPSB4-201ENST00000310546 GPS1Q13098 491 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 MSLNQ13421 630 aaPredicted RBP18.9■□□□□ 0.62
SPSB4-201ENST00000310546 RASA3Q14644 834 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 C1orf228Q6PIY5 440 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 HHIPL2Q6UWX4 724 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 ETNPPLQ8TBG4 499 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 FAM172AQ8WUF8 416 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 NAP1L4Q99733 375 aaKnown RBP18.9■□□□□ 0.62
SPSB4-201ENST00000310546 USP29Q9HBJ7 922 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 MTMR4Q9NYA4 1195 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 PAIP2BQ9ULR5 123 aaKnown RBP18.9■□□□□ 0.62
SPSB4-201ENST00000310546 ZNF148Q9UQR1 794 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 MEI4A8MW99 385 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 F5H6K3 240 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 ZBTB39O15060 712 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 KLRC2P26717 231 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 CENPCQ03188 943 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 TFDP1Q14186 410 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 GRM2Q14416 872 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 CCNG2Q16589 344 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 KAZNQ674X7 775 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 RINT1Q6NUQ1 792 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 ZNF554Q86TJ5 538 aa18.9■□□□□ 0.62
SPSB4-201ENST00000310546 PRPF31Q8WWY3 499 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms