RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ZC3H14Q6PJT7 736 aaKnown RBP20.96■□□□□ 0.95
LIME1-201ENST00000309546 HS2ST1Q7LGA3 356 aa20.96■□□□□ 0.95
LIME1-201ENST00000309546 TOP6BLQ8N6T0 577 aa20.96■□□□□ 0.95
LIME1-201ENST00000309546 CSGALNACT1Q8TDX6 532 aa20.96■□□□□ 0.95
LIME1-201ENST00000309546 HPDLQ96IR7 371 aa20.96■□□□□ 0.95
LIME1-201ENST00000309546 IL21Q9HBE4 155 aa20.96■□□□□ 0.95
LIME1-201ENST00000309546 MAGED2Q9UNF1 606 aaPredicted RBP20.96■□□□□ 0.95
LIME1-201ENST00000309546 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
LIME1-201ENST00000309546 SHISA7A6NL88 538 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 TGFB1I1O43294 461 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 PRAMEF12O95522 483 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 TNNI1P19237 187 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 EHHADHQ08426 723 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 CCDC142Q17RM4 750 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 WDR49Q8IV35 697 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 MAML2Q8IZL2 1156 aaPredicted RBP20.95■□□□□ 0.94
LIME1-201ENST00000309546 ADSSL1Q8N142 457 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 FAM3CQ92520 227 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 FNBP1Q96RU3 617 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 SMG9Q9H0W8 520 aaKnown RBP20.95■□□□□ 0.94
LIME1-201ENST00000309546 TASP1Q9H6P5 420 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 TRPV5Q9NQA5 729 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 SERTAD1Q9UHV2 236 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 GTF3C4Q9UKN8 822 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 DMDP11532 3685 aa20.95■□□□□ 0.94
LIME1-201ENST00000309546 KIF26AQ9ULI4 1882 aaPredicted RBP20.94■□□□□ 0.94
LIME1-201ENST00000309546 CHADO15335 359 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 CYP2F1P24903 491 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 PCSK1P29120 753 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 LHX1P48742 406 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 FCHO2Q0JRZ9 810 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 DDR2Q16832 855 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 SOWAHAQ2M3V2 549 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 SPATA2LQ8IUW3 424 aaPredicted RBP20.94■□□□□ 0.94
LIME1-201ENST00000309546 XXYLT1Q8NBI6 393 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 LEO1Q8WVC0 666 aaPredicted RBP20.94■□□□□ 0.94
LIME1-201ENST00000309546 CLDN23Q96B33 292 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 CCDC127Q96BQ5 260 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 ZFYVE19Q96K21 471 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 RCOR1Q9UKL0 485 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 VPS13AQ96RL7 3174 aa20.94■□□□□ 0.94
LIME1-201ENST00000309546 F5P12259 2224 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 PVALEFA0A1B0GWK0 134 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 SLC38A8A6NNN8 435 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 ARNTLO00327 626 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 CCNE1P24864 410 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 RPS9P46781 194 aaKnown RBP20.93■□□□□ 0.94
LIME1-201ENST00000309546 SOX9P48436 509 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 KPNA1P52294 538 aaPredicted RBP20.93■□□□□ 0.94
LIME1-201ENST00000309546 PSMC1P62191 440 aaKnown RBP20.93■□□□□ 0.94
LIME1-201ENST00000309546 CSTF1Q05048 431 aaKnown RBP20.93■□□□□ 0.94
LIME1-201ENST00000309546 CYP24A1Q07973 514 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 TRAPPC11Q7Z392 1133 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 TTC8Q8TAM2 541 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 SPATA18Q8TC71 538 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 CHAMP1Q96JM3 812 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 MMS19Q96T76 1030 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 PKMYT1Q99640 499 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 CGRRF1Q99675 332 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 FBXO4Q9UKT5 387 aa20.93■□□□□ 0.94
LIME1-201ENST00000309546 GABRDO14764 452 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 LMNAP02545 664 aaKnown RBP20.92■□□□□ 0.94
LIME1-201ENST00000309546 SLFN14P0C7P3 912 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 CSH1P0DML2 217 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 CSH2P0DML3 217 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 HMGA1P17096 107 aaKnown RBP20.92■□□□□ 0.94
LIME1-201ENST00000309546 NLRP12P59046 1061 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 SNRPFP62306 86 aaKnown RBP20.92■□□□□ 0.94
LIME1-201ENST00000309546 RPL10AP62906 217 aaKnown RBP20.92■□□□□ 0.94
LIME1-201ENST00000309546 FZD5Q13467 585 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 PSMD6Q15008 389 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 BMT2Q1RMZ1 405 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 ARHGAP29Q52LW3 1261 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 SCN4BQ8IWT1 228 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 MAB21L3Q8N8X9 362 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 BPIFB1Q8TDL5 484 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 SPATA32Q96LK8 384 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 LRRC3BQ96PB8 259 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 SYT15Q9BQS2 421 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 SLC46A2Q9BY10 475 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 SEMA4AQ9H3S1 761 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 ABCB6Q9NP58 842 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 EXOC1Q9NV70 894 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 OBP2AQ9NY56 170 aa20.92■□□□□ 0.94
LIME1-201ENST00000309546 A0A1B0GVL5 298 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 MYBPHLA2RUH7 354 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 FAM186AA6NE01 2351 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 ACTN4O43707 911 aaKnown RBP20.91■□□□□ 0.94
LIME1-201ENST00000309546 ATP2C2O75185 946 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 CLSTN1O94985 981 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 F11P03951 625 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 PFKFB1P16118 471 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 AVPR1AP37288 418 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 MTAPQ13126 283 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 TSSK4Q6SA08 328 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 DPH6Q7L8W6 267 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 TMEM150AQ86TG1 271 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 KBTBD7Q8WVZ9 684 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 LMAN1LQ9HAT1 526 aa20.91■□□□□ 0.94
LIME1-201ENST00000309546 GTSE1Q9NYZ3 720 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms