RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 UBA3Q8TBC4 463 aa22.48■■□□□ 1.19
ATG4D-201ENST00000309469 PCYOX1Q9UHG3 505 aa22.48■■□□□ 1.19
ATG4D-201ENST00000309469 ST3GAL5Q9UNP4 418 aa22.48■■□□□ 1.19
ATG4D-201ENST00000309469 SCN10AQ9Y5Y9 1956 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 POLR3GO15318 223 aaPredicted RBP22.47■■□□□ 1.19
ATG4D-201ENST00000309469 DAPK3O43293 454 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 CHRNA1P02708 482 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 ERBB2P04626 1255 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 KRT3P12035 628 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 CYP3A5P20815 502 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 ECHS1P30084 290 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 PTGIRP43119 386 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 GABRB2P47870 512 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 AARSP49588 968 aaKnown RBP eCLIP22.47■■□□□ 1.19
ATG4D-201ENST00000309469 PDCLQ13371 301 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 STILQ15468 1287 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 FBXO47Q5MNV8 452 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 TTC27Q6P3X3 843 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 XYLT1Q86Y38 959 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 ZBTB9Q96C00 473 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 TRIM51Q9BSJ1 452 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 SENP6Q9GZR1 1112 aaPredicted RBP22.47■■□□□ 1.19
ATG4D-201ENST00000309469 F8VP50 259 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 RPLP2P05387 115 aaKnown RBP22.47■■□□□ 1.19
ATG4D-201ENST00000309469 CTSHP09668 335 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 LLGL1Q15334 1064 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 KCTD19Q17RG1 926 aaPredicted RBP22.47■■□□□ 1.19
ATG4D-201ENST00000309469 SOWAHAQ2M3V2 549 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 CCDC137Q6PK04 289 aaKnown RBP22.47■■□□□ 1.19
ATG4D-201ENST00000309469 JAMLQ86YT9 394 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 NIPA2Q8N8Q9 360 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 C12orf29Q8N999 325 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 C12orf50Q8NA57 414 aaPredicted RBP22.47■■□□□ 1.19
ATG4D-201ENST00000309469 EXD1Q8NHP7 514 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 MAIP1Q8WWC4 291 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 RUNDC3BQ96NL0 473 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 ERP44Q9BS26 406 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 FAM114A2Q9NRY5 505 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 TSPAN16Q9UKR8 245 aa22.47■■□□□ 1.19
ATG4D-201ENST00000309469 CST5P28325 142 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-201ENST00000309469 RFC1P35251 1148 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-201ENST00000309469 COILP38432 576 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-201ENST00000309469 PNPLA4P41247 253 aa22.46■■□□□ 1.19
ATG4D-201ENST00000309469 SOX4Q06945 474 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-201ENST00000309469 NFX1Q12986 1120 aaKnown RBP22.46■■□□□ 1.19
ATG4D-201ENST00000309469 LRRC38Q5VT99 294 aa22.46■■□□□ 1.19
ATG4D-201ENST00000309469 ACOT1Q86TX2 421 aa22.46■■□□□ 1.19
ATG4D-201ENST00000309469 UNC93AQ86WB7 457 aa22.46■■□□□ 1.19
ATG4D-201ENST00000309469 ZNF560Q96MR9 790 aa22.46■■□□□ 1.19
ATG4D-201ENST00000309469 LRRC19Q9H756 370 aa22.46■■□□□ 1.19
ATG4D-201ENST00000309469 SRRDQ9UH36 339 aa22.46■■□□□ 1.19
ATG4D-201ENST00000309469 NME7Q9Y5B8 376 aa22.46■■□□□ 1.19
ATG4D-201ENST00000309469 GRIN2DO15399 1336 aa22.45■■□□□ 1.19
ATG4D-201ENST00000309469 KPNA7A9QM74 516 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 MGAT3Q09327 533 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 CCDC50Q8IVM0 306 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 TSEN2Q8NCE0 465 aaKnown RBP22.45■■□□□ 1.18
ATG4D-201ENST00000309469 OR6B3Q8NGW1 331 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 JOSD2Q8TAC2 188 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 DPH5Q9H2P9 285 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 CHST12Q9NRB3 414 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 GDAP2Q9NXN4 497 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 RASAL2Q9UJF2 1139 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 SPTLC1O15269 473 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 GJC1P36383 396 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 FNTAP49354 379 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 TERF2Q15554 542 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 GOLGA7BQ2TAP0 167 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 HSP90B2PQ58FF3 399 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 DUPD1Q68J44 220 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 MREGQ8N565 214 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 PCSK9Q8NBP7 692 aaKnown RBP22.45■■□□□ 1.18
ATG4D-201ENST00000309469 MCRS1Q96EZ8 462 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 HERPUD2Q9BSE4 406 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 GOLGA2P5Q9HBQ8 144 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 MED4Q9NPJ6 270 aa22.45■■□□□ 1.18
ATG4D-201ENST00000309469 PFKMP08237 780 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 RALAP11233 206 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 TCF4P15884 667 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 HOXD10P28358 340 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 TAF6P49848 677 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 PTGISQ16647 500 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 PPP1R26Q5T8A7 1209 aaPredicted RBP22.44■■□□□ 1.18
ATG4D-201ENST00000309469 RCOR2Q8IZ40 523 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 FNIP1Q8TF40 1166 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 CFHR5Q9BXR6 569 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 TRIM31Q9BZY9 425 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 NEUROG2Q9H2A3 272 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 FAM105AQ9NUU6 356 aa22.44■■□□□ 1.18
ATG4D-201ENST00000309469 GOLGA6BA6NDN3 693 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 A8MXQ7 604 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 PODXLO00592 558 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 PTGESO14684 152 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 PSMA2P25787 234 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 THPOP40225 353 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 SV2CQ496J9 727 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 ATP13A4Q4VNC1 1196 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 CCDC105Q8IYK2 499 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 CD99L2Q8TCZ2 262 aa22.43■■□□□ 1.18
ATG4D-201ENST00000309469 IPO4Q8TEX9 1081 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms