RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SMARCAD1Q9H4L7 1026 aa10.9□□□□□ -0.66
APOBEC3F-201ENST00000308521 GPBP1L1Q9HC44 474 aaPredicted RBP10.9□□□□□ -0.66
APOBEC3F-201ENST00000308521 WDR35Q9P2L0 1181 aa10.9□□□□□ -0.66
APOBEC3F-201ENST00000308521 MANSC4A6NHS7 340 aaPredicted RBP10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 DYNC1LI2O43237 492 aaPredicted RBP10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 CREB3O43889 395 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 ECEL1O95672 775 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 GH1P01241 217 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 KRT16P08779 473 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 ITIH2P19823 946 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 MSH2P43246 934 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 RANBP1P43487 201 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 LAMTOR4Q0VGL1 99 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 STRN3Q13033 797 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 CRHR2Q13324 411 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 TMED1Q13445 227 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 DBN1Q16643 649 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 CYP4F22Q6NT55 531 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 EFCAB12Q6NXP0 572 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 INTS8Q75QN2 995 aaKnown RBP10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 PLPPR4Q7Z2D5 763 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 ZBTB33Q86T24 672 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 LMNTD2Q8IXW0 634 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 ABRAQ8N0Z2 381 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 SLC20A1Q8WUM9 679 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 IQCGQ9H095 443 aaKnown RBP10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 VTA1Q9NP79 307 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 AAASQ9NRG9 546 aa10.9□□□□□ -0.67
APOBEC3F-201ENST00000308521 CTGFP29279 349 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 RTP1P59025 263 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 NLRP11P59045 1033 aaKnown RBP10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 LACTBP83111 547 aaPredicted RBP10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 CAV1Q03135 178 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 LAMC2Q13753 1193 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 ACBD5Q5T8D3 534 aaPredicted RBP10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 NUGGCQ68CJ6 796 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 CFAP61Q8NHU2 1237 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 TMEM174Q8WUU8 243 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 KAT5Q92993 513 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 MAGEB18Q96M61 343 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 OSBPL1AQ9BXW6 950 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 TMEM117Q9H0C3 514 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 ERAP1Q9NZ08 941 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 LGALS13Q9UHV8 139 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 GMEB1Q9Y692 573 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 FSCN2O14926 492 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 DIAPH2O60879 1101 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 CYP1A2P05177 515 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 RFC5P40937 340 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 NAMPTP43490 491 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 ATP11AP98196 1134 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 SF3A3Q12874 501 aaKnown RBP eCLIP10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 MESDQ14696 234 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 LONRF1Q17RB8 773 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 BRDTQ58F21 947 aaPredicted RBP10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 SCARA3Q6AZY7 606 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 SLC17A8Q8NDX2 589 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 TCHPQ9BT92 498 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 ARHGAP39Q9C0H5 1083 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 ACTL7BQ9Y614 415 aa10.89□□□□□ -0.67
APOBEC3F-201ENST00000308521 TCRBV7S2A1N4TA0A589 114 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 FAM155AB1AL88 458 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 TP73O15350 636 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 ATP5HO75947 161 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 TTC4O95801 387 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 SLC10A3P09131 477 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 MAN1A1P33908 653 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 PSMC4P43686 418 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 CETN1Q12798 172 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 LRRC14Q15048 493 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 C17orf99Q6UX52 265 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 TSHZ1Q6ZSZ6 1077 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 ARHGEF19Q8IW93 802 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 C12orf56Q8IXR9 622 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 FITM2Q8N6M3 262 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 OR6J1Q8NGC5 347 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 TEKT4Q8WW24 435 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 PSPC1Q8WXF1 523 aaKnown RBP10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 FAM167AQ96KS9 214 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 RAB3IPQ96QF0 476 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 C16orf70Q9BSU1 422 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 PI4K2AQ9BTU6 479 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 DDX23Q9BUQ8 820 aaKnown RBP10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 TRIM4Q9C037 500 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 ABHD16BQ9H3Z7 469 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 MINDY3Q9H8M7 445 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 UBE2TQ9NPD8 197 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 ADAM22Q9P0K1 906 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 ZNF232Q9UNY5 417 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 SLC15A5A6NIM6 579 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 H3BRB1 525 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 B4GALT5O43286 388 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 ADCY3O60266 1144 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 VTNP04004 478 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 TPP2P29144 1249 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 OSTNP61366 133 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 TNFAIP2Q03169 654 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
APOBEC3F-201ENST00000308521 MTFR1Q15390 333 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms