RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 PRPF39Q86UA1 669 aaKnown RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 CCNYL1Q8N7R7 359 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 MKL1Q969V6 931 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 KCNG1Q9UIX4 513 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 POLIQ9UNA4 740 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 SNX9Q9Y5X1 595 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 IGLV3-22A0A075B6J6 115 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 EDIL3O43854 480 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 KRT38O76015 456 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 GJB1P08034 283 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 PTGIRP43119 386 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 CLCN3P51790 818 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 CNTN2Q02246 1040 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ITKQ08881 620 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ASPHQ12797 758 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 PGM5Q15124 567 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 RBBP5Q15291 538 aaKnown RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 GLRA4Q5JXX5 417 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 TRIM72Q6ZMU5 477 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ABRAQ8N0Z2 381 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 PPWD1Q96BP3 646 aaKnown RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 DDX50Q9BQ39 737 aaKnown RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 MRPL4Q9BYD3 311 aaKnown RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ZDHHC18Q9NUE0 388 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 APOBEC2Q9Y235 224 aaKnown RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 GOLGB1Q14789 3259 aaKnown RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ROBO3Q96MS0 1386 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 BTNL10A8MVZ5 291 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 MEI4A8MW99 385 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 PIK3CDO00329 1044 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 CCDC22O60826 627 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 HSPA4LO95757 839 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 TYK2P29597 1187 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 SERPINB4P48594 390 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 TFDP3Q5H9I0 405 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ATG16L1Q676U5 607 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ZNF572Q7Z3I7 529 aaPredicted RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 SLFN11Q7Z7L1 901 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 RNF135Q8IUD6 432 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 C3orf20Q8ND61 904 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 TMEM161BQ8NDZ6 487 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 BSNDQ8WZ55 320 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ZNF75CPQ92670 426 aaPredicted RBP11.88□□□□□ -0.51
PHTF2-203ENST00000307305 EXT2Q93063 718 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 TBC1D10AQ9BXI6 508 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 ASNSD1Q9NWL6 643 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 STXBP5LQ9Y2K9 1186 aa11.88□□□□□ -0.51
PHTF2-203ENST00000307305 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
PHTF2-203ENST00000307305 ITGB3P05106 788 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 GHRP10912 638 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 ECHS1P30084 290 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 ARL4AP40617 200 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 CENPCQ03188 943 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 KCTD2Q14681 263 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
PHTF2-203ENST00000307305 NBPF12Q5TAG4 269 aaPredicted RBP11.87□□□□□ -0.51
PHTF2-203ENST00000307305 CES3Q6UWW8 571 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 GLIS1Q8NBF1 620 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 MIEF2Q96C03 454 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 TMEM59LQ9UK28 342 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 TCF4P15884 667 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 TNFSF9P41273 254 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 SLC12A2P55011 1212 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 CUL3Q13618 768 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 TFDP2Q14188 446 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 SYDE1Q6ZW31 735 aaPredicted RBP11.87□□□□□ -0.51
PHTF2-203ENST00000307305 ANO5Q75V66 913 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 FLAD1Q8NFF5 587 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
PHTF2-203ENST00000307305 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 CRYBG1Q9Y4K1 1723 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
PHTF2-203ENST00000307305 RASSF9O75901 435 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 RFC1P35251 1148 aaPredicted RBP11.87□□□□□ -0.51
PHTF2-203ENST00000307305 BTKQ06187 659 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 FAAP100Q0VG06 881 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 SLC1A5Q15758 541 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 BMT2Q1RMZ1 405 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 MMEL1Q495T6 779 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 ECHDC2Q86YB7 292 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 HACE1Q8IYU2 909 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 CEP120Q8N960 986 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 MTBPQ96DY7 904 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 TMEM120AQ9BXJ8 343 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 RANBP17Q9H2T7 1088 aaKnown RBP11.87□□□□□ -0.51
PHTF2-203ENST00000307305 NDE1Q9NXR1 346 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 GSTA1P08263 222 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 DSG3P32926 999 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 CRADDP78560 199 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 RASSF3Q86WH2 238 aa11.87□□□□□ -0.51
PHTF2-203ENST00000307305 RYBPQ8N488 228 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms