RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ARMCX1Q9P291 453 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 DOLKQ9UPQ8 538 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 TRIM49D1C9J1S8 452 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 CYP27B1O15528 508 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 MLNP12872 115 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 DHX34Q14147 1143 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 GRM4Q14833 912 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 TMEM121Q9BTD3 319 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 PARVBQ9HBI1 364 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 STAP1Q9ULZ2 295 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 PPIEQ9UNP9 301 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 OR1G1P47890 313 aa13.15□□□□□ -0.31
USP38-201ENST00000307017 FMO5P49326 533 aa13.15□□□□□ -0.31
USP38-201ENST00000307017 DAB2IPQ5VWQ8 1189 aa13.15□□□□□ -0.31
USP38-201ENST00000307017 B3GALNT2Q8NCR0 500 aa13.15□□□□□ -0.31
USP38-201ENST00000307017 STAMBPL1Q96FJ0 436 aa13.15□□□□□ -0.31
USP38-201ENST00000307017 NARS2Q96I59 477 aaKnown RBP13.15□□□□□ -0.31
USP38-201ENST00000307017 EHD4Q9H223 541 aa13.15□□□□□ -0.31
USP38-201ENST00000307017 SH3GLB2Q9NR46 395 aa13.15□□□□□ -0.31
USP38-201ENST00000307017 ABI2Q9NYB9 513 aaPredicted RBP13.15□□□□□ -0.31
USP38-201ENST00000307017 C3orf70A6NLC5 250 aaPredicted RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 FAM25AB3EWG3 89 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 FAM25CB3EWG5 89 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 FAM25GB3EWG6 89 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 H3BQF6 201 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 SCTRP47872 440 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 STAT4Q14765 748 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 ZCWPW2Q504Y3 356 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 ZCCHC23Q6ZST2 131 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 GPR141Q7Z602 305 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 POU5F2Q8N7G0 328 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 IL25Q9H293 177 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 NSMCE4AQ9NXX6 385 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 ZNF212Q9UDV6 495 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 GMFGO60234 142 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 TPH1P17752 444 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 COG2Q14746 738 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 CLEC16AQ2KHT3 1053 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 ITPRIPL1Q6GPH6 555 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 IZUMO2Q6UXV1 221 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 ANKS3Q6ZW76 656 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 RCOR2Q8IZ40 523 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 CENPLQ8N0S6 344 aaPredicted RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 TOPORSQ9NS56 1045 aaPredicted RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 RNF112Q9ULX5 631 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 KCNQ2O43526 872 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 SUPT7LO94864 414 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 TBXAS1P24557 533 aaPredicted RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 AADACL2Q6P093 401 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 BPIFA3Q9BQP9 254 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 GPR63Q9BZJ6 419 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 GID8Q9NWU2 228 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 FEM1BQ9UK73 627 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 SCAMP3O14828 347 aaKnown RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 P4HA2O15460 535 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 LIFRP42702 1097 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 ABCG1P45844 678 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 CDK17Q00537 523 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 P3H2Q8IVL5 708 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 MRPL40Q9NQ50 206 aaKnown RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 KLHL1Q9NR64 748 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 UTP6Q9NYH9 597 aaKnown RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 METP08581 1390 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 CYP51A1Q16850 503 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 TYW3Q6IPR3 259 aaKnown RBP13.14□□□□□ -0.31
USP38-201ENST00000307017 CYP2R1Q6VVX0 501 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 NLRP9Q7RTR0 991 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 MED8Q96G25 268 aa13.14□□□□□ -0.31
USP38-201ENST00000307017 AGTP01019 485 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 ITGB3P05106 788 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 GARTP22102 1010 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 TNFAIP2Q03169 654 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 NR1H3Q13133 447 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 NR1I3Q14994 352 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 SCFD2Q8WU76 684 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 CTNNAL1Q9UBT7 734 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 PROM2Q8N271 834 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 TUBGCP3Q96CW5 907 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 TMEM120AQ9BXJ8 343 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 GJB6O95452 261 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 NQO1P15559 274 aaKnown RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 ERVK-24P63145 666 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 RUNX1T1Q06455 604 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 C12orf60Q5U649 245 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 LUZP2Q86TE4 346 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 CALML6Q8TD86 181 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms