RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 KIF4AO95239 1232 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 CXCL10P02778 98 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 ERBB2P04626 1255 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 VDRP11473 427 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 MMP8P22894 467 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 ACAT1P24752 427 aaKnown RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 NSFP46459 744 aaKnown RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 MARCKSL1P49006 195 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 AARSP49588 968 aaKnown RBP eCLIP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 CTCFP49711 727 aaPredicted RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 HADHBP55084 474 aaKnown RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 PSMC1P62191 440 aaKnown RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 GRIK3Q13003 919 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 GOLGA7BQ2TAP0 167 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 PKDCCQ504Y2 493 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 C1orf53Q5VUE5 145 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 NT5DC3Q86UY8 548 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 TTC30AQ86WT1 665 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 HACE1Q8IYU2 909 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 ADGRF2Q8IZF7 708 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 TXLNBQ8N3L3 684 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 PGBD4Q96DM1 585 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 MS4A14Q96JA4 679 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 CAPZA3Q96KX2 299 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 SENP8Q96LD8 212 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 CASD1Q96PB1 797 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 ALS2CR12Q96Q35 445 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 CPXM1Q96SM3 734 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 OSBPL9Q96SU4 736 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 RTP3Q9BQQ7 232 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 NT5C1AQ9BXI3 368 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 SEZ6LQ9BYH1 1024 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 PDCL3Q9H2J4 239 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 C11orf49Q9H6J7 331 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 SLC38A7Q9NVC3 462 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 DNAJB4Q9UDY4 337 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 MYH10P35580 1976 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 TRIM43BA6NCK2 446 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 A8MXQ7 604 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 DCDC2CA8MYV0 355 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 M0QYV0 167 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 PIK3R2O00459 728 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 GABRDO14764 452 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 DDX3YO15523 660 aaKnown RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 SLU7O95391 586 aaKnown RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 WARSP23381 471 aaKnown RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 GNL1P36915 607 aaPredicted RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 PNPLA4P41247 253 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 GPD2P43304 727 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 RABGGTBP53611 331 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 OGDHQ02218 1023 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 DSC1Q08554 894 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 ZNF252P-AS1Q0IIN9 211 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 TUSC3Q13454 348 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 MAMLD1Q13495 774 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 MESDQ14696 234 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 CNGA2Q16280 664 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 SGO2Q562F6 1265 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 NOMO2Q5JPE7 1267 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 DCAF12L1Q5VU92 463 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 DAAM2Q86T65 1068 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 CREG2Q8IUH2 290 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 APPL2Q8NEU8 664 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 ZNF564Q8TBZ8 553 aaPredicted RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 TRIM43Q96BQ3 446 aaPredicted RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 PIWIL1Q96J94 861 aaKnown RBP6.13□□□□□ -1.43
TTC39C-201ENST00000304621 TOX2Q96NM4 488 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 LHX5Q9H2C1 402 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 EPC1Q9H2F5 836 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 TBC1D13Q9NVG8 400 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 ADAM22Q9P0K1 906 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 TSPAN16Q9UKR8 245 aa6.13□□□□□ -1.43
TTC39C-201ENST00000304621 CLDN5O00501 218 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 CTIFO43310 598 aaKnown RBP6.12□□□□□ -1.43
TTC39C-201ENST00000304621 HUS1O60921 280 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 TADA3O75528 432 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 LSM8O95777 96 aaKnown RBP6.12□□□□□ -1.43
TTC39C-201ENST00000304621 EOMESO95936 686 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 SKIP12755 728 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 COMTP21964 271 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 ADORA2BP29275 332 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 RPL9P32969 192 aaKnown RBP6.12□□□□□ -1.43
TTC39C-201ENST00000304621 GTF2F1P35269 517 aaKnown RBP eCLIP6.12□□□□□ -1.43
TTC39C-201ENST00000304621 RGS7P49802 495 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 RPL7AP62424 266 aaKnown RBP6.12□□□□□ -1.43
TTC39C-201ENST00000304621 PLEKHA7Q6IQ23 1121 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 AADACL2Q6P093 401 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 LCLAT1Q6UWP7 414 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 PAQR9Q6ZVX9 377 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 TMCO2Q7Z6W1 182 aaPredicted RBP6.12□□□□□ -1.43
TTC39C-201ENST00000304621 RHOT2Q8IXI1 618 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 COLGALT2Q8IYK4 626 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 CRYBG2Q8N1P7 616 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 TOP6BLQ8N6T0 577 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 TMEM35BQ8NCS4 154 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 SEPT8Q92599 483 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 ALG3Q92685 438 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 KRT35Q92764 455 aa6.12□□□□□ -1.43
TTC39C-201ENST00000304621 TMEM209Q96SK2 561 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms