RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FAM111AQ96PZ2 611 aa14.52□□□□□ -0.08
PRKCB-201ENST00000303531 C17orf75Q9HAS0 396 aa14.52□□□□□ -0.08
PRKCB-201ENST00000303531 SERPINB10P48595 397 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 RBM43Q6ZSC3 357 aaKnown RBP14.52□□□□□ -0.09
PRKCB-201ENST00000303531 CBWD2Q8IUF1 395 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 TEX9Q8N6V9 391 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 TFB1MQ8WVM0 346 aaKnown RBP14.52□□□□□ -0.09
PRKCB-201ENST00000303531 OTUB1Q96FW1 271 aaPredicted RBP14.52□□□□□ -0.09
PRKCB-201ENST00000303531 SEPT5Q99719 369 aaPredicted RBP14.52□□□□□ -0.09
PRKCB-201ENST00000303531 KBTBD4Q9NVX7 518 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 PCSK1P29120 753 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 TCF7P36402 384 aaPredicted RBP14.52□□□□□ -0.09
PRKCB-201ENST00000303531 NEK2P51955 445 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 GPRASP2Q96D09 838 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 IL1RL2Q9HB29 575 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 ZNF229Q9UJW7 825 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 ZNF711Q9Y462 761 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 LRRIQ3A6PVS8 624 aaPredicted RBP14.52□□□□□ -0.09
PRKCB-201ENST00000303531 MYO1GB0I1T2 1018 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 CAND2O75155 1236 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 RANBP1P43487 201 aa14.52□□□□□ -0.09
PRKCB-201ENST00000303531 SPDYE5A6NIY4 337 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 CYP2C9P11712 490 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 FBXW4P57775 412 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 SPDYE7PQ495Y7 208 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 NAPEPLDQ6IQ20 393 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 CHST13Q8NET6 341 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 GGA3Q9NZ52 723 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 PHTF1Q9UMS5 762 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 FAM95CA0A1B0GW59 222 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 SFMBT1Q9UHJ3 866 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 SPATA31A1Q5TZJ5 1347 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 ETFBP38117 255 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 SNAPC2Q13487 334 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 BOLA3Q53S33 107 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 LAYNQ6UX15 382 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 ZNF512Q96ME7 567 aaPredicted RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 LSM7Q9UK45 103 aaKnown RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 TBC1D4O60343 1298 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 ASMTLO95671 621 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 DDX5P17844 614 aaKnown RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 TWF1Q12792 350 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 PAPD7Q5XG87 772 aaKnown RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 FRMD8Q9BZ67 464 aaPredicted RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 MYOZ2Q9NPC6 264 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 C16orf96A6NNT2 1141 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 SLC25A27O95847 323 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 UBTFL6P0CB48 400 aaPredicted RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 HSPA1AP0DMV8 641 aaKnown RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 HSPA1BP0DMV9 641 aaKnown RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 GIT2Q14161 759 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 FBXO28Q9NVF7 368 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 ICAM1P05362 532 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 PRLRP16471 622 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 CDH2P19022 906 aaPredicted RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 STIP1P31948 543 aaKnown RBP14.51□□□□□ -0.09
PRKCB-201ENST00000303531 ORC1Q13415 861 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 NBPF20Q3BBV1 942 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 RAB42Q8N4Z0 105 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 MRGBPQ9NV56 204 aa14.51□□□□□ -0.09
PRKCB-201ENST00000303531 C5orf58C9J3I9 102 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 MTSS1O43312 755 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 KIF1CO43896 1103 aaKnown RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 HNRNPCP07910 306 aaKnown RBP eCLIP14.5□□□□□ -0.095e-6■■■□□ 16.3
PRKCB-201ENST00000303531 IRF1P10914 325 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 CYP11B1P15538 503 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 DDX53Q86TM3 631 aaKnown RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 ZBTB39O15060 712 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 APOA1P02647 267 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 KRT16P08779 473 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 H2AFXP16104 143 aaPredicted RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 FIGNQ5HY92 759 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 NOTUMQ6P988 496 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 MYCBPAPQ8TBZ2 947 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 WNK4Q96J92 1243 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 LACRTQ9GZZ8 138 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 IQCA1LA6NCM1 817 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 SETD3Q86TU7 594 aaPredicted RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 ZCWPW1Q9H0M4 648 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 ASCC2Q9H1I8 757 aaPredicted RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 NOD2Q9HC29 1040 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 PTK6Q13882 451 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 SNX17Q15036 470 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 TAF1CQ15572 869 aaPredicted RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 PTRHD1Q6GMV3 140 aaKnown RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 FAM162AQ96A26 154 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 CBWD1Q9BRT8 395 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 ARHGEF9O43307 516 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 SERPIND1P05546 499 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 FAM200BP0CF97 657 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 ADCK1Q86TW2 530 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 ATP8B4Q8TF62 1192 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 KAZALD1Q96I82 304 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 FOPNLQ96NB1 174 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 TMEM161AQ9NX61 479 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 FAM32AQ9Y421 112 aaKnown RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 PPRC1Q5VV67 1664 aaKnown RBP14.5□□□□□ -0.09
PRKCB-201ENST00000303531 FKBP9O95302 570 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 COPAP53621 1224 aa14.5□□□□□ -0.09
PRKCB-201ENST00000303531 LRRC74AQ0VAA2 488 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms