RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 LSM8O95777 96 aaKnown RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF394Q53GI3 561 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 KLHDC7AQ5VTJ3 777 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 TMEM117Q9H0C3 514 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 CD274Q9NZQ7 290 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 CNOT7Q9UIV1 285 aaKnown RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 PHTF1Q9UMS5 762 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 CFAP99D6REC4 459 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 CLPTM1O96005 669 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 RARGP13631 454 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 COMTP21964 271 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 GRK2P25098 689 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 NUDT2P50583 147 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 NAB1Q13506 487 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 RABL6Q3YEC7 729 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 GJC2Q5T442 439 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 MEI1Q5TIA1 1274 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 NUDT18Q6ZVK8 323 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 GALNT4Q8N4A0 578 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 OLFM1Q99784 485 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 PRKAG2Q9UGJ0 569 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 MAGEB2O15479 319 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 LTKP29376 864 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 KIF2BQ8N4N8 673 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 CASKIN2Q8WXE0 1202 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 FAM49AQ9H0Q0 323 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 DBNDD1Q9H9R9 158 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 PLAGL2Q9UPG8 496 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 NEMP1O14524 444 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 GZMAP12544 262 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 GPD1P21695 349 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SLC29A2Q14542 456 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 TRIM65Q6PJ69 517 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 RFX8Q6ZV50 586 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SLC22A9Q8IVM8 553 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CCDC60Q8IWA6 550 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MARCOQ9UEW3 520 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MINPP1Q9UNW1 487 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 ANKRD6Q9Y2G4 727 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 PIK3C2BO00750 1634 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 RNF103O00237 685 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MAFGO15525 162 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 VEPH1Q14D04 833 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 RBBP8NLQ8NC74 664 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 POP5Q969H6 163 aaKnown RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 FANCEQ9HB96 536 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 RNF146Q9NTX7 359 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CPS1P31327 1500 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MYL3P08590 195 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 LCP1P13796 627 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 ARPP19P56211 112 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 DALRD3Q5D0E6 543 aaKnown RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 PCNX4Q63HM2 1172 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 ATXN7L3BQ96GX2 97 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF518BQ9C0D4 1074 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 NIF3L1Q9GZT8 377 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 AGPAT5Q9NUQ2 364 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 DLG5Q8TDM6 1919 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 NMT2O60551 498 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 IFNA14P01570 189 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 PRKCBP05771 671 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 FXR1P51114 621 aaKnown RBP eCLIP7.94□□□□□ -1.146e-7■□□□□ 11.1
SF3B3-201ENST00000302516 SESN2P58004 480 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CCDC153Q494R4 210 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 C12orf60Q5U649 245 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SCN4BQ8IWT1 228 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 IGDCC4Q8TDY8 1250 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 GANCQ8TET4 914 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SPATA16Q9BXB7 569 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 KCND1Q9NSA2 647 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 ITM2BQ9Y287 266 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 VPS4BO75351 444 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CYP2C8P10632 490 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 IYDQ6PHW0 289 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 RAD9BQ6WBX8 426 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 EIF1ADQ8N9N8 165 aaKnown RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SHCBP1Q8NEM2 672 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 ALG13Q9NP73 1137 aaKnown RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CHMP2BQ9UQN3 213 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 H7C0S8 307 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 XPO1O14980 1071 aaKnown RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 TDP2O95551 362 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 PNPLA4P41247 253 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MTA1Q13330 715 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SV2CQ496J9 727 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 EFHC1Q5JVL4 640 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CIAPIN1Q6FI81 312 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SLC13A5Q86YT5 568 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MICU2Q8IYU8 434 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 AGR3Q8TD06 166 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 NT5C1AQ9BXI3 368 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 TMEM260Q9NX78 707 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 NARFQ9UHQ1 456 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 EIF3LQ9Y262 564 aaKnown RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 TBKBP1A7MCY6 615 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 KPNA4O00629 521 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CYP2D6P10635 497 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 RRM2P31350 389 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 TRIM28Q13263 835 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms