RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 FAM105AQ9NUU6 356 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PRLRP16471 622 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 EDNRBP24530 442 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PMS1P54277 932 aaKnown RBP8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 BIRC2Q13490 618 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 SNX1Q13596 522 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 FAM117BQ6P1L5 589 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 CCDC149Q6ZUS6 474 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 ANKS3Q6ZW76 656 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 ACOT1Q86TX2 421 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.72□□□□□ -1.013e-6■■■■□ 22.3
SNRPD1-201ENST00000300413 VPS18Q9P253 973 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 OR6C75A6NL08 312 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 XYLBO75191 536 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PIGRP01833 764 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 LAG3P18627 525 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 RFC2P35250 354 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 GJA9P57773 515 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 ATP11AP98196 1134 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 SFSWAPQ12872 951 aaKnown RBP8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 C11orf63Q6NUN7 778 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 LRRC8DQ7L1W4 858 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 KIAA0319LQ8IZA0 1049 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PDZD8Q8NEN9 1154 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 FBXO32Q969P5 355 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 RNF25Q96BH1 459 aaPredicted RBP8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PPCSQ9HAB8 311 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 MSRAQ9UJ68 235 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 NOC2LQ9Y3T9 749 aaKnown RBP8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PTCH2Q9Y6C5 1203 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 SLX4Q8IY92 1834 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 EOMESO95936 686 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 GUCY2FP51841 1108 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PLTPP55058 493 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 TUSC3Q13454 348 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 ZNF235Q14590 738 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PPP2R5DQ14738 602 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 RABGAP1LQ5R372 815 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 USP13Q92995 863 aaPredicted RBP8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 IFT43Q96FT9 208 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 HSFY1Q96LI6 401 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 PLCD4Q9BRC7 762 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 FSD1LQ9BXM9 530 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 TLR8Q9NR97 1041 aaKnown RBP8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 BFARQ9NZS9 450 aa8.72□□□□□ -1.01
SNRPD1-201ENST00000300413 EEF2KO00418 725 aaKnown RBP8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 FAM163BP0C2L3 166 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 CXCR5P32302 372 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 PSEN1P49768 467 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 AMPD2Q01433 879 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 RAD9BQ6WBX8 426 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 TMC7Q7Z402 723 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 UNC45BQ8IWX7 931 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 SLC30A5Q8TAD4 765 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 CCDC110Q8TBZ0 833 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 SMC6Q96SB8 1091 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 GAD1Q99259 594 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 TXNRD2Q9NNW7 524 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 ATG7O95352 703 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 SGPL1O95470 568 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 C22orf31O95567 290 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 ARF4P18085 180 aaPredicted RBP8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 MSH2P43246 934 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 ST8SIA6P61647 398 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 C2orf54Q08AI8 447 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 FAM187BQ17R55 369 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 PABPC1LQ4VXU2 614 aaKnown RBP8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 CEP85LQ5SZL2 805 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 CCDC13Q8IYE1 715 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 VPS39Q96JC1 886 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 SENP8Q96LD8 212 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 KRT82Q9NSB4 513 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 SQORQ9Y6N5 450 aa8.71□□□□□ -1.01
SNRPD1-201ENST00000300413 CASTOR2A6NHX0 329 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 PMM2O15305 246 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 NCAM1P13591 858 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 AKAP5P24588 427 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 PAPOLAP51003 745 aaKnown RBP8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 NDST1P52848 882 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 ACLYP53396 1101 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 CNGA2Q16280 664 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 MEA1Q16626 185 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 KLHL38Q2WGJ6 581 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 PREPLQ4J6C6 727 aaPredicted RBP8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 DCAF6Q58WW2 860 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 E4F1Q66K89 784 aaPredicted RBP8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 SLC7A14Q8TBB6 771 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 FAM71BQ8TC56 605 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 SPATA18Q8TC71 538 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 PYROXD1Q8WU10 500 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 SNF8Q96H20 258 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.71□□□□□ -1.022e-6■■■■□ 19.9
SNRPD1-201ENST00000300413 SAGE1Q9NXZ1 904 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 HEY1Q9Y5J3 304 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 PHF2O75151 1096 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 MOCS2O96007 188 aaPredicted RBP8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 POMCP01189 267 aa8.71□□□□□ -1.02
SNRPD1-201ENST00000300413 S100BP04271 92 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms