RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PLEKHA8Q96JA3 519 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RFX7Q2KHR2 1363 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PRR23D1E9PI22 279 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CTDNEP1O95476 244 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 APOA1P02647 267 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PRR23D2P0DMB1 279 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 LSP1P33241 339 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MEI1Q5TIA1 1274 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CASKIN2Q8WXE0 1202 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CATSPERBQ9H7T0 1116 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PTPRHQ9HD43 1115 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DPP3Q9NY33 737 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RUVBL2Q9Y230 463 aaKnown RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 LOC102724159A0A0B4J2E5 919 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PWP2Q15269 919 aaKnown RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 LRIG3Q6UXM1 1119 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PACSIN1Q9BY11 444 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DUSP10Q9Y6W6 482 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GMPSP49915 693 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 OTOAQ7RTW8 1153 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CNDP1Q96KN2 507 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MTMR12Q9C0I1 747 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PSMD3O43242 534 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TFE3P19532 575 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SPRP35270 261 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 HARS2P49590 506 aaKnown RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 POU4F1Q01851 419 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PGS1Q32NB8 556 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 STRIP1Q5VSL9 837 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TBC1D19Q8N5T2 526 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 C10orf53Q8N6V4 93 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 E2F7Q96AV8 911 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 APOL2Q9BQE5 337 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ALDH8A1Q9H2A2 487 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NMRK2Q9NPI5 230 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PAK5Q9P286 719 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PCDHB8Q9UN66 801 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PTGER2P43116 358 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SOX10P56693 466 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CDC16Q13042 620 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 USP38Q8NB14 1042 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 STKLD1Q8NE28 680 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZFP42Q96MM3 310 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CD248Q9HCU0 757 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TNS3Q68CZ2 1445 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GUCA1CO95843 209 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CD4P01730 458 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 THPOP40225 353 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SRLQ86TD4 932 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CCDC60Q8IWA6 550 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MAGEB10Q96LZ2 347 aaPredicted RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MYOZ2Q9NPC6 264 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 FBXO28Q9NVF7 368 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 WWOXQ9NZC7 414 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CRLS1Q9UJA2 301 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZCCHC11Q5TAX3 1644 aaKnown RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PPP1R3GB7ZBB8 358 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SNRPAP09012 282 aaKnown RBP14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MAP3K10Q02779 954 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SNX17Q15036 470 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TRADDQ15628 312 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZSWIM2Q8NEG5 633 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TMEM106CQ9BVX2 250 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KATNAL1Q9BW62 490 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZSCAN32Q9NX65 697 aa14.12□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TRIM49D1C9J1S8 452 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CDH16O75309 829 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CSDE1O75534 798 aaKnown RBP14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 EPHB2P29323 1055 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PDK1Q15118 436 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ACOT1Q86TX2 421 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CARNMT1Q8N4J0 409 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CATSPER1Q8NEC5 780 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 HACL1Q9UJ83 578 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ITIH6Q6UXX5 1313 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CLTCL1P53675 1640 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CCL15-CCL14A0A0B4J2E2 113 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CLASP2O75122 1294 aaKnown RBP14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 FDPSP14324 419 aaKnown RBP14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ALDH1A3P47895 512 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SERPINB9P50453 376 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NCALDP61601 193 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CCL15Q16663 113 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DNAL1Q4LDG9 190 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CCT7Q99832 543 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SERPINI2O75830 405 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 IL18RAPO95256 599 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RBP3P10745 1247 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 S100A5P33763 92 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SERPINB10P48595 397 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GEMIN4P57678 1058 aaKnown RBP14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MIB1Q86YT6 1006 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 WDCPQ9H6R7 721 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 IARS2Q9NSE4 1012 aaKnown RBP14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 WDR35Q9P2L0 1181 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 AGRPO00253 132 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ADRA2BP18089 450 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CLEC16AQ2KHT3 1053 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ALFQ53S48 1182 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms