RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 DNAJB3Q8WWF6 145 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 FAM81BQ96LP2 452 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 NIFKQ9BYG3 293 aaKnown RBP9.81□□□□□ -0.84
PRDM9-201ENST00000296682 RRAGCQ9HB90 399 aa9.81□□□□□ -0.84
PRDM9-201ENST00000296682 CALB1P05937 261 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 CD48P09326 243 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 MMRN1Q13201 1228 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 C4orf33Q8N1A6 199 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 FAM71DQ8N9W8 422 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 GRK7Q8WTQ7 553 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 SNF8Q96H20 258 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 TTLL3Q9Y4R7 772 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 TIMM13Q9Y5L4 95 aaPredicted RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 ATXN2Q99700 1313 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 EXOC1LA0A1B0GW35 172 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 GMNCA6NCL1 334 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 CYP2C9P11712 490 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 STX2P32856 288 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 PDIA2Q13087 525 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 LAMC2Q13753 1193 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 FAM133BQ5BKY9 247 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 ZPBP2Q6X784 338 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 PALM2Q8IXS6 379 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 C1orf127Q8N9H9 656 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 ZNF473Q8WTR7 871 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 CPXM1Q96SM3 734 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 B3GNT5Q9BYG0 378 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 MROH8Q9H579 483 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 DPP3Q9NY33 737 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 SEPT10Q9P0V9 454 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 RALGAPA2Q2PPJ7 1873 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 CNTNAP2Q9UHC6 1331 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 C6orf222P0C671 652 aaPredicted RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 P4HA1P13674 534 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 BRAFP15056 766 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 ACO1P21399 889 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 ACAT1P24752 427 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 ICAM3P32942 547 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 RDXP35241 583 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 GJA5P36382 358 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 SLMAPQ14BN4 828 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 PTPN20Q4JDL3 420 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 NUGGCQ68CJ6 796 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 CASC4Q6P4E1 433 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 C2orf69Q8N8R5 385 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 NDRG1Q92597 394 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 C18orf25Q96B23 403 aaPredicted RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 DCLK3Q9C098 648 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 CXCL16Q9H2A7 254 aa9.8□□□□□ -0.84
PRDM9-201ENST00000296682 PIH1D1Q9NWS0 290 aaKnown RBP9.8□□□□□ -0.84
PRDM9-201ENST00000296682 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 ZC3H11AO75152 810 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 SKOR1P84550 965 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 OGDHQ02218 1023 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 TNFAIP2Q03169 654 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 GRIK4Q16099 956 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PTGISQ16647 500 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 RAB6CQ53S08 254 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 SH3D19Q5HYK7 790 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 NPNTQ6UXI9 565 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 CCDC125Q86Z20 511 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 ACTL9Q8TC94 416 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MAIP1Q8WWC4 291 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MED10Q9BTT4 135 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 RAB6CQ9H0N0 254 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PRMT7Q9NVM4 692 aaPredicted RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 NKIRAS1Q9NYS0 192 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 NEU2Q9Y3R4 380 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MAD1L1Q9Y6D9 718 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 IKBKGQ9Y6K9 419 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PLXNA1Q9UIW2 1896 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MED7O43513 233 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PRPSAP2O60256 369 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MYBL1P10243 752 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 GBP2P32456 591 aaPredicted RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 SLC1A1P43005 524 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PTGIRP43119 386 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 YWHAGP61981 247 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 CENPCQ03188 943 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PTPN11Q06124 597 aaPredicted RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PPIL2Q13356 520 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 FBXW10Q5XX13 1052 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 ZDHHC24Q6UX98 284 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MON1BQ7L1V2 547 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 ANKS1BQ7Z6G8 1248 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 CACNA2D3Q8IZS8 1091 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 FBXO41Q8TF61 875 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 TMEM134Q9H6X4 195 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 CDHR5Q9HBB8 845 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 GRHL1Q9NZI5 618 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 SAMD15Q9P1V8 674 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 CPSF3Q9UKF6 684 aaKnown RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 NR2E3Q9Y5X4 410 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 ZNF236Q9UL36 1845 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 RASA4BC9J798 803 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PPEF2O14830 753 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 RASA4O43374 803 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 ZNF157P51786 506 aaPredicted RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 YWHAEP62258 255 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms