RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 SGTAO43765 313 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 PRKD3O94806 890 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 RARGP13631 454 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 SPRED3Q2MJR0 410 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 TMEM139Q8IV31 216 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 TTC5Q8N0Z6 440 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 FIG4Q92562 907 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 LIN28AQ9H9Z2 209 aaKnown RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 FAM105AQ9NUU6 356 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 UBA2Q9UBT2 640 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 IFT52Q9Y366 437 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 TRIM49BA6NDI0 452 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 B8ZZF3 427 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 S100A6P06703 90 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ALADP13716 330 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 C4BPBP20851 252 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 CCNE1P24864 410 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 SETD3Q86TU7 594 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ARID3BQ8IVW6 561 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 PM20D2Q8IYS1 436 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ENDOVQ8N8Q3 282 aaKnown RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 BTBD9Q96Q07 612 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 APOL4Q9BPW4 351 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ARMCX1Q9P291 453 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 EDARQ9UNE0 448 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 PI4KAP2A4QPH2 592 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 C12orf71A8MTZ7 269 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 SEMA3AQ14563 771 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 LDLRAP1Q5SW96 308 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 KRT79Q5XKE5 535 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 BORAQ6PGQ7 559 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 ALLCQ8N6M5 410 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 PI4KAP1Q8N8J0 262 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 OR8K3Q8NH51 312 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 NARS2Q96I59 477 aaKnown RBP12.21□□□□□ -0.45
SNIP1-201ENST00000296215 TUBA1CQ9BQE3 449 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 SYNDIG1Q9H7V2 258 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 COQ3Q9NZJ6 369 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 TRMT6Q9UJA5 497 aaKnown RBP12.21□□□□□ -0.45
SNIP1-201ENST00000296215 F8W031 263 aaPredicted RBP12.21□□□□□ -0.45
SNIP1-201ENST00000296215 F8W8V4 182 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 SEC24AO95486 1093 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 CALML3P27482 149 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 PIK3AP1Q6ZUJ8 805 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 C9orf72Q96LT7 481 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 SAV1Q9H4B6 383 aaPredicted RBP12.21□□□□□ -0.45
SNIP1-201ENST00000296215 FANCEQ9HB96 536 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 CEP72Q9P209 647 aa12.21□□□□□ -0.45
SNIP1-201ENST00000296215 EVLQ9UI08 416 aaPredicted RBP12.21□□□□□ -0.45
SNIP1-201ENST00000296215 SRPRBQ9Y5M8 271 aaKnown RBP12.21□□□□□ -0.45
SNIP1-201ENST00000296215 PRXQ9BXM0 1461 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 MEI1Q5TIA1 1274 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 DYMQ7RTS9 669 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 OR8H1Q8NGG4 311 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 GAB3Q8WWW8 586 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 PIK3R3Q92569 461 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 OSBP2Q969R2 916 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 DMRTB1Q96MA1 342 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 CLK4Q9HAZ1 481 aaKnown RBP12.21□□□□□ -0.46
SNIP1-201ENST00000296215 THAP1Q9NVV9 213 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 CUEDC1Q9NWM3 386 aaPredicted RBP12.21□□□□□ -0.46
SNIP1-201ENST00000296215 USTQ9Y2C2 406 aa12.21□□□□□ -0.46
SNIP1-201ENST00000296215 STT3AP46977 705 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 NT5C2P49902 561 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 LRRC8EQ6NSJ5 796 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 SHQ1Q6PI26 577 aaKnown RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 GALNT12Q8IXK2 581 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ALDH16A1Q8IZ83 802 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 TAB3Q8N5C8 712 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 VPS33AQ96AX1 596 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 MTERF3Q96E29 417 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 CRNNQ9UBG3 495 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 NOX1Q9Y5S8 564 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 SERPINB7O75635 380 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ASNSP08243 561 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 GNL1P36915 607 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 HSD17B4P51659 736 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 AASDHQ4L235 1098 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ANKLE2Q86XL3 938 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ANKS1AQ92625 1134 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 CDKL2Q92772 493 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 GLG1Q92896 1179 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 HAPLN3Q96S86 360 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 PDCD10Q9BUL8 212 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 MTMR12Q9C0I1 747 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 PNPLA3Q9NST1 481 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 GINM1Q9NU53 330 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 PCDH10Q9P2E7 1040 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 HAT1O14929 419 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 TAF5LO75529 589 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 UFL1O94874 794 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 CAMTA2O94983 1202 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF3P17036 446 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 MAGP20916 626 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 PTPREP23469 700 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 RPL35P42766 123 aaKnown RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 NRF1Q16656 503 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms