RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CELF3Q5SZQ8 465 aaKnown RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 CENPPQ6IPU0 288 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 TRAPPC12Q8WVT3 735 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 PTPRN2Q92932 1015 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 TMEM176AQ96HP8 235 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 CYP4F11Q9HBI6 524 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 FGFR1OP2Q9NVK5 253 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 PPARGC1AQ9UBK2 798 aaKnown RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 ZC3H7BQ9UGR2 993 aaKnown RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 ATMINO43313 823 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 MGEA5O60502 916 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 TLR2O60603 784 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 PDAP1Q13442 181 aaKnown RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 GPR142Q7Z601 462 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 NUDCD3Q8IVD9 361 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 REM2Q8IYK8 340 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 KLRG1Q96E93 195 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 SLC13A1Q9BZW2 595 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 PCDHB5Q9Y5E4 795 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 A0A0G2JND7 137 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 ETFBP38117 255 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SOX10P56693 466 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SMTNL2Q2TAL5 461 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 ANKRD20A4Q4UJ75 823 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 ANKRD20A8PQ5CZ79 823 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 ANKRD20A2Q5SQ80 823 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 ANKRD20A1Q5TYW2 823 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 TAS1R2Q8TE23 839 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 ARHGEF38Q9NXL2 777 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SENP1Q9P0U3 644 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 C3P01024 1663 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 DCTN3O75935 186 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 GFAPP14136 432 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SESN3P58005 492 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 PTPN11Q06124 597 aaPredicted RBP18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SPDL1Q96EA4 605 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 CDK5RAP1Q96SZ6 601 aaKnown RBP18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SYT15Q9BQS2 421 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 EMILIN2Q9BXX0 1053 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 CISHQ9NSE2 258 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SH3BGRP55822 239 aaPredicted RBP18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SMAD1Q15797 465 aaKnown RBP18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 SV2AQ7L0J3 742 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 LATS2Q9NRM7 1088 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 VGLL3A8MV65 326 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 ANXA9O76027 345 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 KLK7P49862 253 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 PLD1Q13393 1074 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 TRIM68Q6AZZ1 485 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 IPMKQ8NFU5 416 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 TRIM45Q9H8W5 580 aaPredicted RBP18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 NSMCE4AQ9NXX6 385 aa18.49■□□□□ 0.55
CDC42EP3-201ENST00000295324 CXCL17Q6UXB2 119 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 DDX43Q9NXZ2 648 aaKnown RBP18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 PLAGL2Q9UPG8 496 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 ZNF263O14978 683 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 TTI2Q6NXR4 508 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 MOB2Q70IA6 237 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 BHMTQ93088 406 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 ORC1Q13415 861 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 MDH1BQ5I0G3 518 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 ASS1P00966 412 aaKnown RBP18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 PYGLP06737 847 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 CENPCQ03188 943 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 BST2Q10589 180 aaKnown RBP18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 RBM15Q96T37 977 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 XPO7Q9UIA9 1087 aaKnown RBP18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 PKP3Q9Y446 797 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 CYTH3O43739 400 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 LSM8O95777 96 aaKnown RBP18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 CYP11B1P15538 503 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 KLRC2P26717 231 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 RGS4P49798 205 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 MORF4L2Q15014 288 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 ANKMY2Q8IV38 441 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 RUBCNQ92622 972 aa18.48■□□□□ 0.55
CDC42EP3-201ENST00000295324 ATXN7L3BQ96GX2 97 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 PDLIM2Q96JY6 352 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 TRIM15Q9C019 465 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 INTS13Q9NVM9 706 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 MRFAP1Q9Y605 127 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 FRMPD4Q14CM0 1322 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 SLC12A8A0AV02 714 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 KDM1AO60341 852 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 RNASEH1O60930 286 aaKnown RBP18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 FAM171A1Q5VUB5 890 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 LINC00523Q86TU6 105 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 POP1Q99575 1024 aaKnown RBP18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 SEMA6BQ9H3T3 888 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 OPHN1O60890 802 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 SPAG6O75602 509 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 AKAP3O75969 853 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 SGPL1O95470 568 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 AKAP5P24588 427 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms