RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 GRAP2O75791 330 aa16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 LSM8O95777 96 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 PECAM1P16284 738 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 KLRC2P26717 231 aa16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 TAF5Q15542 800 aa16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 CROCCP2Q86T23 111 aa16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 ANKMY2Q8IV38 441 aa16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 CCDC197Q8NCU1 140 aa16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 ROPN1BQ9BZX4 212 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 VPS37BQ9H9H4 285 aa16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 ROPN1Q9HAT0 212 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 FGFR1OP2Q9NVK5 253 aa16.66■□□□□ 0.26
NCKIPSD-201ENST00000294129 SRRM3A6NNA2 597 aaPredicted RBP16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 DNM1LO00429 736 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 SLC25A27O95847 323 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 IL1R2P27930 398 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 HNRNPH1P31943 449 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 NRLP54845 237 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 GAD2Q05329 585 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 TFDP3Q5H9I0 405 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 KIAA0319LQ8IZA0 1049 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 C3orf20Q8ND61 904 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 CDCA5Q96FF9 252 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 SERPINB12Q96P63 405 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 TMEM109Q9BVC6 243 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 SAMD15Q9P1V8 674 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 NAALADL1Q9UQQ1 740 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 OTOFQ9HC10 1997 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 hCG_1818297A0A087WSY0 165 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 IGKV6-21A0A0C4DH24 114 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 M0QYV0 167 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 LGR5O75473 907 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 MPP2Q14168 576 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 TTLL4Q14679 1199 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 MFSD5Q6N075 450 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 PLPPR4Q7Z2D5 763 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 HEXIM2Q96MH2 286 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 FZD8Q9H461 694 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 HBP1O60381 514 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 CST8O60676 142 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 SPAG7O75391 227 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 ERBB2P04626 1255 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 POLR2BP30876 1174 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 MNAT1P51948 309 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 CAV1Q03135 178 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 TMEM62Q0P6H9 643 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 PIGHQ14442 188 aaPredicted RBP16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 SURF1Q15526 300 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 CDO1Q16878 200 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 EAPPQ56P03 285 aaPredicted RBP16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 HIBCHQ6NVY1 386 aaPredicted RBP16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 CCDC62Q6P9F0 684 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 VSTM1Q6UX27 236 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 ZBED8Q8IZ13 594 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 CENPTQ96BT3 561 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 CALN1Q9BXU9 219 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 PTPRHQ9HD43 1115 aa16.65■□□□□ 0.26
NCKIPSD-201ENST00000294129 EXOC1LA0A1B0GW35 172 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 TCRBV5S1A1TA0A578 114 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 C5orf60A6NFR6 353 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 EIF4BP23588 611 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 CDKN2BP42772 138 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 RAD23BP54727 409 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 NUGGCQ68CJ6 796 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 ARMCX2Q7L311 632 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 NLRP7Q8WX94 980 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 ERAP1Q9NZ08 941 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 LRCH4O75427 683 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 PROZP22891 400 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 GDF10P55107 478 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 OTUD4Q01804 1114 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 KCNV1Q6PIU1 500 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 ANKS4BQ8N8V4 417 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 ACTL9Q8TC94 416 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 AFG1LQ8WV93 481 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 THOC1Q96FV9 657 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 ELOVL4Q9GZR5 314 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 IFT122Q9HBG6 1241 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 AGAP1Q9UPQ3 857 aa16.64■□□□□ 0.25
NCKIPSD-201ENST00000294129 SPDYE5A6NIY4 337 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 RASA4BC9J798 803 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 RASA4O43374 803 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 B4GALT4O60513 344 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 RAB6CQ53S08 254 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 FAM133BQ5BKY9 247 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 ALLCQ8N6M5 410 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 ARFGAP1Q8N6T3 406 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 BBOF1Q8ND07 529 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 RAB6CQ9H0N0 254 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 KIF9Q9HAQ2 790 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 DNALI1O14645 258 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 GAS2O43903 313 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 C22orf31O95567 290 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 VCPP55072 806 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 ACTN3Q08043 901 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 GRM1Q13255 1194 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 ANKRD20A8PQ5CZ79 823 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 PPP1R15BQ5SWA1 713 aa16.63■□□□□ 0.25
NCKIPSD-201ENST00000294129 SH3PXD2AQ5TCZ1 1133 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms