RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 NEUROG2Q9H2A3 272 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 LRRC19Q9H756 370 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 XPNPEP3Q9NQH7 507 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 TJP2Q9UDY2 1190 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 NME7Q9Y5B8 376 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 SNX9Q9Y5X1 595 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 SIGLEC16A6NMB1 481 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 M0QZ92 97 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 AGPSO00116 658 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 DAPK3O43293 454 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 AOC2O75106 756 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 COILP38432 576 aaPredicted RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 HSPA9P38646 679 aaKnown RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 KLF1Q13351 362 aaPredicted RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 ZNF268Q14587 947 aaPredicted RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 CCSAPQ6IQ19 270 aaPredicted RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 DCUN1D2Q6PH85 259 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 LIMS2Q7Z4I7 341 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 RSPH3Q86UC2 560 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 UNC93AQ86WB7 457 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 DDX42Q86XP3 938 aaKnown RBP eCLIP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 REM2Q8IYK8 340 aaPredicted RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 ARRDC4Q8NCT1 418 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 MCRS1Q96EZ8 462 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 HEXIM2Q96MH2 286 aaKnown RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 ZNF560Q96MR9 790 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 ERP44Q9BS26 406 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 RASAL2Q9UJF2 1139 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 USTQ9Y2C2 406 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 GOLGA6BA6NDN3 693 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 SYF2O95926 243 aaKnown RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 TCF4P15884 667 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 CCND3P30281 292 aaPredicted RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PNPLA4P41247 253 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 DRG2P55039 364 aaKnown RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PSMC1P62191 440 aaKnown RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 SP3Q02447 781 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 SOX4Q06945 474 aaPredicted RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 HLTFQ14527 1009 aaKnown RBP eCLIP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PKDCCQ504Y2 493 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 FBXO47Q5MNV8 452 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 ALS2CLQ60I27 953 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 CCDC137Q6PK04 289 aaKnown RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 GDAP2Q9NXN4 497 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 KLK14Q9P0G3 267 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PARP2Q9UGN5 583 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 TSPAN16Q9UKR8 245 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 F8VP50 259 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 GOLGA8SH3BPF8 625 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PODXLO00592 558 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PFKMP08237 780 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PTPN7P35236 360 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 RFC1P35251 1148 aaPredicted RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 SOWAHAQ2M3V2 549 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 GOLGA7BQ2TAP0 167 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 HSP90B2PQ58FF3 399 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 MAP3K21Q5TCX8 1036 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 TWF2Q6IBS0 349 aaKnown RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 POLNQ7Z5Q5 900 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 JOSD2Q8TAC2 188 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 KBTBD7Q8WVZ9 684 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 SH3GL2Q99962 352 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 METTL5Q9NRN9 209 aaKnown RBP10.75□□□□□ -0.69
C9orf43-201ENST00000288462 ZDHHC18Q9NUE0 388 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 RNF186Q9NXI6 227 aa10.75□□□□□ -0.69
C9orf43-201ENST00000288462 PTGESO14684 152 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 SPTLC1O15269 473 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 RPS6KA5O75582 802 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 CHRNA1P02708 482 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 ASGR1P07306 291 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 SETSIPP0DME0 302 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 RALAP11233 206 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 KRT3P12035 628 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 ELNP15502 786 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 LRPAP1P30533 357 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 GBP1P32455 592 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 GGCXP38435 758 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 SLC25A11Q02978 314 aaKnown RBP10.74□□□□□ -0.69
C9orf43-201ENST00000288462 SV2CQ496J9 727 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 ARHGAP17Q68EM7 881 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 RCOR2Q8IZ40 523 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 IPO4Q8TEX9 1081 aaKnown RBP10.74□□□□□ -0.69
C9orf43-201ENST00000288462 RBM41Q96IZ5 413 aaKnown RBP10.74□□□□□ -0.69
C9orf43-201ENST00000288462 CAPNS2Q96L46 248 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 PPP1R10Q96QC0 940 aaKnown RBP10.74□□□□□ -0.69
C9orf43-201ENST00000288462 OSBPL8Q9BZF1 889 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 DPH5Q9H2P9 285 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 SYNCQ9H7C4 482 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 CHST12Q9NRB3 414 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 GRHL1Q9NZI5 618 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 ST3GAL5Q9UNP4 418 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 TSC2P49815 1807 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 GRIN2DO15399 1336 aa10.74□□□□□ -0.69
C9orf43-201ENST00000288462 KPNA7A9QM74 516 aa10.73□□□□□ -0.69
C9orf43-201ENST00000288462 POLR3GO15318 223 aaPredicted RBP10.73□□□□□ -0.69
C9orf43-201ENST00000288462 KRT1P04264 644 aa10.73□□□□□ -0.69
C9orf43-201ENST00000288462 CTSHP09668 335 aa10.73□□□□□ -0.69
C9orf43-201ENST00000288462 PSMA2P25787 234 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms