RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 XPO7Q9UIA9 1087 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 QSER1Q2KHR3 1735 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 COPEO14579 308 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 MAFO75444 373 aaPredicted RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 UBOX5O94941 541 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 ASS1P00966 412 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 PIGRP01833 764 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 TXNP10599 105 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 UBA1P22314 1058 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 STIP1P31948 543 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 BCAR1P56945 870 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 OTUD4Q01804 1114 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 ATG16L1Q676U5 607 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 RPAINQ86UA6 219 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 NIFKQ9BYG3 293 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 DHX33Q9H6R0 707 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 CYP3A43Q9HB55 503 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 RXFP1Q9HBX9 757 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 NOD2Q9HC29 1040 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 GGT7Q9UJ14 662 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 LPXNO60711 386 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 KRT38O76015 456 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 RBP3P10745 1247 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 GPD1P21695 349 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 PCK1P35558 622 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 ARL2P36404 184 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 KCTD19Q17RG1 926 aaPredicted RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 SLC39A4Q6P5W5 647 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 PDZD4Q76G19 769 aaPredicted RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 BZW1Q7L1Q6 419 aaKnown RBP10.55□□□□□ -0.72
HMGCR-201ENST00000287936 ALLCQ8N6M5 410 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 TXLNGYQ9BZA5 131 aa10.55□□□□□ -0.72
HMGCR-201ENST00000287936 LRRC37AA6NMS7 1700 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 PECAM1P16284 738 aaPredicted RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ARL4AP40617 200 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 CAPSQ13938 189 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 TMEM132DQ14C87 1099 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ZNF449Q6P9G9 518 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 C3orf62Q6ZUJ4 267 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 OR5B17Q8NGF7 314 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 DDX1Q92499 740 aaKnown RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 THOC1Q96FV9 657 aaKnown RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 PAK5Q9P286 719 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 MAFBQ9Y5Q3 323 aaPredicted RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 IGF2BP3O00425 579 aaKnown RBP eCLIP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 APOL1O14791 398 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 VDRP11473 427 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 PDGFRAP16234 1089 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 MMP8P22894 467 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ATICP31939 592 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 MAP3K10Q02779 954 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ZNF268Q14587 947 aaPredicted RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 SMTNL2Q2TAL5 461 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 EFCAB12Q6NXP0 572 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 POLNQ7Z5Q5 900 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ACSF2Q96CM8 615 aaPredicted RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ZNF668Q96K58 619 aaPredicted RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 CCDC134Q9H6E4 229 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 PNMA3Q9UL41 463 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 KIAA1257Q9ULG3 409 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 AGAP1Q9UPQ3 857 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ADGRA3Q8IWK6 1321 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 CDK5RAP2Q96SN8 1893 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 TMEM191CA6NGB0 347 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ACKR2O00590 384 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 LMNAP02545 664 aaKnown RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ZFXP17010 805 aaPredicted RBP10.54□□□□□ -0.72
HMGCR-201ENST00000287936 CCND1P24385 295 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ACAP1Q15027 740 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 RIOX2Q8IUF8 465 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 CCDC110Q8TBZ0 833 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ACTL9Q8TC94 416 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 ACAP3Q96P50 834 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 TMEM121Q9BTD3 319 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 CD248Q9HCU0 757 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 LGALS13Q9UHV8 139 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 PHTF1Q9UMS5 762 aa10.54□□□□□ -0.72
HMGCR-201ENST00000287936 HAUS5O94927 633 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 CNTN2Q02246 1040 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 SWT1Q5T5J6 900 aaKnown RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 LVRNQ6Q4G3 990 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 C4orf22Q6V702 233 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 CCT6BQ92526 530 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 TTC17Q96AE7 1141 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 SPATC1LQ9H0A9 340 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 ERAP1Q9NZ08 941 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 CTNNAL1Q9UBT7 734 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 R3HDM2Q9Y2K5 976 aaKnown RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 GJB6O95452 261 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 ITGAVP06756 1048 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 C6orf89Q6UWU4 347 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 N4BP2L2Q92802 583 aaPredicted RBP10.53□□□□□ -0.72
HMGCR-201ENST00000287936 ERP27Q96DN0 273 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 SNX25Q9H3E2 840 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 F8VP50 259 aa10.53□□□□□ -0.72
HMGCR-201ENST00000287936 TCEA3O75764 348 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms