RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 TTC8Q8TAM2 541 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 TARS2Q9BW92 718 aaKnown RBP13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 SLC24A3Q9HC58 644 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 RNF146Q9NTX7 359 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 DCTN4Q9UJW0 460 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 TCRBV5S1A1TA0A578 114 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 GOLGA8RI6L899 631 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 RGS20O76081 388 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 CTCFP49711 727 aaPredicted RBP13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 RASSF2P50749 326 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 ZNF132P52740 706 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 ACTR2P61160 394 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 OVGP1Q12889 678 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 BLMHQ13867 455 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 ZNF394Q53GI3 561 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 FNBP1LQ5T0N5 605 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 ASAP3Q8TDY4 903 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 PYROXD1Q8WU10 500 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 KLF6Q99612 283 aaPredicted RBP13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 PPCSQ9HAB8 311 aa13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
SLC28A1-201ENST00000286749 PARP14Q460N5 1801 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 C2CD2LO14523 706 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 PTPN7P35236 360 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 GDF10P55107 478 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 RASA2Q15283 850 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 SLC45A4Q5BKX6 768 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 CYP4A22Q5TCH4 519 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 RFWD2Q8NHY2 731 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 SLC35B2Q8TB61 432 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 PAFAH2Q99487 392 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 DENND2DQ9H6A0 471 aaPredicted RBP13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 RPAP3Q9H6T3 665 aaPredicted RBP13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 SLC9A2Q9UBY0 812 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 COL4A5P29400 1685 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 K7ERI5 159 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 ENTPD5O75356 428 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 LUC7L3O95232 432 aaKnown RBP13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 EDN1P05305 212 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 PHBP35232 272 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 MAP3K10Q02779 954 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 MTMR2Q13614 643 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 CAPRIN2Q6IMN6 1127 aaKnown RBP13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 CLNKQ7Z7G1 428 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 RHPN2Q8IUC4 686 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 ATP11CQ8NB49 1132 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 DEPTORQ8TB45 409 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 TCP10LQ8TDR4 215 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 CPT1BQ92523 772 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 ATG4CQ96DT6 458 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 ALG13Q9NP73 1137 aaKnown RBP13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 SSU72Q9NP77 194 aaKnown RBP13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 DDX56Q9NY93 547 aaKnown RBP13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 KANSL3Q9P2N6 904 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 SLC17A7Q9P2U7 560 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 FBXO40Q9UH90 709 aa13.92□□□□□ -0.18
SLC28A1-201ENST00000286749 CNTNAP2Q9UHC6 1331 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 TRAFD1O14545 582 aaPredicted RBP13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 TROVE2P10155 538 aaKnown RBP eCLIP13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 PTPN4P29074 926 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ARL4CP56559 192 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 OTUD4Q01804 1114 aaKnown RBP13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 SMTNL2Q2TAL5 461 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 XRRA1Q6P2D8 792 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 C3orf62Q6ZUJ4 267 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 PPIL6Q8IXY8 311 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ACTL9Q8TC94 416 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ANKRD27Q96NW4 1050 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 WDR83Q9BRX9 315 aaKnown RBP13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ZNRF3Q9ULT6 936 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 AGTPBP1Q9UPW5 1226 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 VWA5AO00534 786 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 CST3P01034 146 aaPredicted RBP13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ABCD1P33897 745 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 PIGHQ14442 188 aaPredicted RBP13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 CTC1Q2NKJ3 1217 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 WASHC2DQ5SRD0 308 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 PPP1R15BQ5SWA1 713 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 SLFN12LQ6IEE8 588 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ADGRD1Q6QNK2 874 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ABHD15Q6UXT9 468 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ZNF276Q8N554 614 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 UBR7Q8N806 425 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 FBXO36Q8NEA4 188 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 IMPG2Q9BZV3 1241 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ACSS3Q9H6R3 686 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 ZWILCHQ9H900 591 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 LRRC42Q9Y546 428 aa13.91□□□□□ -0.18
SLC28A1-201ENST00000286749 A0A0B4J269 797 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 C3orf70A6NLC5 250 aaPredicted RBP13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 NDC80O14777 642 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 LIN7AO14910 233 aaPredicted RBP13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 LDHAP00338 332 aaKnown RBP13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 XKR3Q5GH77 459 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 PCGF5Q86SE9 256 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms