RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 NPTX2P47972 431 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 STX1BP61266 288 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 CCNG2Q16589 344 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 MAPK6Q16659 721 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 GRAMD4Q6IC98 578 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 C16orf46Q6P387 395 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 TRIM67Q6ZTA4 783 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 RNF149Q8NC42 400 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 CCDC90BQ9GZT6 254 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 FAM49BQ9NUQ9 324 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 MSX2P35548 267 aaPredicted RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 MRPS9P82933 396 aaKnown RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 FASTKD3Q14CZ7 662 aaKnown RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 ASTE1Q2TB18 679 aaPredicted RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 FASTKD1Q53R41 847 aaKnown RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 SLFN12LQ6IEE8 588 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 POLNQ7Z5Q5 900 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 MCOLN2Q8IZK6 566 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 ALKBH8Q96BT7 664 aaKnown RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 THAP11Q96EK4 314 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 GCNAQ96QF7 691 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 PCDHB18PQ96TA0 734 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 ECE2O60344 883 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 CCND2P30279 289 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 CIITAP33076 1130 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 SLC25A3Q00325 362 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 LRRC8EQ6NSJ5 796 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 ENOSF1Q7L5Y1 443 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 PCDHAC2Q9Y5I4 1007 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 SMARCA1P28370 1054 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 ABCG1P45844 678 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 NT5C2P49902 561 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 ACTR2P61160 394 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 KRT76Q01546 638 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 NME3Q13232 169 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 EFTUD2Q15029 972 aaKnown RBP eCLIP16.41■□□□□ 0.22
USP43-201ENST00000285199 RSBN1LQ6PCB5 846 aaPredicted RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 NIM1KQ8IY84 436 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 DEFB107AQ8IZN7 70 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 OLFML3Q9NRN5 406 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 PDP2Q9P2J9 529 aa16.41■□□□□ 0.22
USP43-201ENST00000285199 TSR3Q9UJK0 312 aaKnown RBP16.41■□□□□ 0.22
USP43-201ENST00000285199 DDX3YO15523 660 aaKnown RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 APBA3O96018 575 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 TBXAS1P24557 533 aaPredicted RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 GSTT1P30711 240 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 SREBF1P36956 1147 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 COPAP53621 1224 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 DUOXA2Q1HG44 320 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 RIBC1Q8N443 379 aaPredicted RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 ETNPPLQ8TBG4 499 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 TAAR1Q96RJ0 339 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 MECRQ9BV79 373 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 DENND2DQ9H6A0 471 aaPredicted RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 NYAP2Q9P242 653 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 GTPBP10A4D1E9 387 aaKnown RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 VCAM1P19320 739 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 TAC1P20366 129 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 EEF1DP29692 281 aaKnown RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 JAK3P52333 1124 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 MORF4L2Q15014 288 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 ACAP1Q15027 740 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 KCTD21Q4G0X4 260 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 PRAMEF18Q5VWM3 479 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 OTOAQ7RTW8 1153 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 CCNJLQ8IV13 435 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 USP6NLQ92738 828 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 CCT7Q99832 543 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 MXRA8Q9BRK3 442 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 NMRK1Q9NWW6 199 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 DTNAQ9Y4J8 743 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 AFF2P51816 1311 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 ARHGAP10A1A4S6 786 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 RBAK-RBAKDNI3L0D1 243 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 HNRNPCL1O60812 293 aaKnown RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 LCA5LO95447 670 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 ADORA2BP29275 332 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 SLC1A5Q15758 541 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 COBLL1Q53SF7 1204 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 ACAD11Q709F0 780 aa16.4■□□□□ 0.22
USP43-201ENST00000285199 UPF3AQ9H1J1 476 aaKnown RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 DDX56Q9NY93 547 aaKnown RBP16.4■□□□□ 0.22
USP43-201ENST00000285199 ASNSP08243 561 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 GSCP56915 257 aaPredicted RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 LACTB2Q53H82 288 aaPredicted RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 TRIM72Q6ZMU5 477 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 LRRC71Q8N4P6 559 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 MPP4Q96JB8 637 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 FAM49AQ9H0Q0 323 aaPredicted RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 MRPL42Q9Y6G3 142 aaKnown RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 GNGT2O14610 69 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 PSMG1O95456 288 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 LDHAP00338 332 aaKnown RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 PROCP04070 461 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 SHMT1P34896 483 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 GLRBP48167 497 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 BNIP1Q12981 228 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 SLC35G1Q2M3R5 365 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms