RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 UNGP13051 313 aaPredicted RBP20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 PTPN1P18031 435 aaKnown RBP20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 FGFR3P22607 806 aa20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 CLEC16AQ2KHT3 1053 aa20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 KIAA0319Q5VV43 1072 aa20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 SLC39A11Q8N1S5 342 aa20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 CYFIP2Q96F07 1278 aa20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 SYT15Q9BQS2 421 aa20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 LACRTQ9GZZ8 138 aa20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 LUC7LQ9NQ29 371 aaKnown RBP20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 AAASQ9NRG9 546 aa20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.08■□□□□ 0.8
PDLIM3-202ENST00000284770 ATP2C2O75185 946 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 SSTR3P32745 418 aaPredicted RBP20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 PSMC1P62191 440 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 SHHQ15465 462 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 ARHGAP29Q52LW3 1261 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 PPP1R26Q5T8A7 1209 aaPredicted RBP20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 ARHGAP17Q68EM7 881 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 LCLAT1Q6UWP7 414 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 KIAA1328Q86T90 577 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 CLP1Q92989 425 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 RNPC3Q96LT9 517 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 LHX5Q9H2C1 402 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 FAM49BQ9NUQ9 324 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 TAS2R14Q9NYV8 317 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 SPG21Q9NZD8 308 aa20.07■□□□□ 0.8
PDLIM3-202ENST00000284770 TSC2P49815 1807 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 TMCO5BA8MYB1 307 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 KIF2AO00139 706 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 RTN2O75298 545 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 LSM8O95777 96 aaKnown RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 LINC00271P0C7V0 271 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 ETF1P62495 437 aaKnown RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 VARS2Q5ST30 1063 aaKnown RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 CEP57Q86XR8 500 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 PASD1Q8IV76 773 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 RNF168Q8IYW5 571 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 TMEM169Q96HH4 297 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 LPIN3Q9BQK8 851 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 ZNF518BQ9C0D4 1074 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 ISCUQ9H1K1 167 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 CRTAC1Q9NQ79 661 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 TRIM10Q9UDY6 481 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 TSPAN16Q9UKR8 245 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 PJA2O43164 708 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 MICAL2O94851 1124 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 FTLP02792 175 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 TUBB4AP04350 444 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 CDH5P33151 784 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 NOMO3P69849 1222 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 MRPL58Q14197 206 aaKnown RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 TAS1R1Q7RTX1 841 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 TTPALQ9BTX7 342 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 IRX2Q9BZI1 471 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 CEP83Q9Y592 693 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 PCDHB12Q9Y5F1 795 aa20.06■□□□□ 0.8
PDLIM3-202ENST00000284770 MYH10P35580 1976 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 PPM1AP35813 382 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 CENPCQ03188 943 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 INTS6LQ5JSJ4 861 aaKnown RBP20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 DNTTIP2Q5QJE6 756 aaKnown RBP20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 ACAD10Q6JQN1 1059 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 DENND1BQ6P3S1 775 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 TXLNBQ8N3L3 684 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 TMEM35BQ8NCS4 154 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 OR10T2Q8NGX3 314 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 CPA5Q8WXQ8 436 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 B3GALT6Q96L58 329 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 VN1R3Q9BXE9 311 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 INTUQ9ULD6 942 aa20.05■□□□□ 0.8
PDLIM3-202ENST00000284770 ATP8B3O60423 1300 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 MYBPHLA2RUH7 354 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 H2AFZP0C0S5 128 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 CCDC130P13994 396 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 GOLGA7BQ2TAP0 167 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 USP41Q3LFD5 358 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 MDH1BQ5I0G3 518 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 RTP2Q5QGT7 225 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 NAA35Q5VZE5 725 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 PPP1R2P3Q6NXS1 205 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 FAM171BQ6P995 826 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 H2AFVQ71UI9 128 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 DNAAF5Q86Y56 855 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 WDTC1Q8N5D0 677 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 MYCBPAPQ8TBZ2 947 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 HNRNPABQ99729 332 aaKnown RBP20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 GDF15Q99988 308 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 PACSIN1Q9BY11 444 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 GTF3C4Q9UKN8 822 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 DUSP10Q9Y6W6 482 aa20.04■□□□□ 0.8
PDLIM3-202ENST00000284770 LCHNA4D1U4 455 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 M0QYV0 167 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 FANCGO15287 622 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 KRT86O43790 486 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 NSFP46459 744 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 GALCP54803 685 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 TSPY1Q01534 308 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 KIF5AQ12840 1032 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms