RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 GOLGA7BQ2TAP0 167 aa12.43□□□□□ -0.42
SSRP1-201ENST00000278412 APBB1IPQ7Z5R6 666 aaPredicted RBP12.43□□□□□ -0.42
SSRP1-201ENST00000278412 SLFN11Q7Z7L1 901 aa12.43□□□□□ -0.42
SSRP1-201ENST00000278412 STKLD1Q8NE28 680 aa12.43□□□□□ -0.42
SSRP1-201ENST00000278412 MNS1Q8NEH6 495 aa12.43□□□□□ -0.42
SSRP1-201ENST00000278412 JOSD2Q8TAC2 188 aa12.43□□□□□ -0.42
SSRP1-201ENST00000278412 RHOXF2Q9BQY4 288 aa12.43□□□□□ -0.42
SSRP1-201ENST00000278412 HIPK3Q9H422 1215 aa12.43□□□□□ -0.42
SSRP1-201ENST00000278412 GTF3C4Q9UKN8 822 aa12.43□□□□□ -0.42
SSRP1-201ENST00000278412 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.43□□□□□ -0.42
SSRP1-201ENST00000278412 PRG3Q9Y2Y8 225 aaPredicted RBP12.43□□□□□ -0.42
SSRP1-201ENST00000278412 NT5C1B-RDH14C9J2C7 533 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 GJC1P36383 396 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 CACNA2D1P54289 1103 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 BPIFB4P59827 614 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 ATP13A4Q4VNC1 1196 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 TXNRD3NBQ6F5E7 133 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.42□□□□□ -0.421e-13■■■■■ 53.4
SSRP1-201ENST00000278412 ADGRF2Q8IZF7 708 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 LRRC52Q8N7C0 313 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 SENP8Q96LD8 212 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 NT5C1AQ9BXI3 368 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 RGS18Q9NS28 235 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 INTUQ9ULD6 942 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.42□□□□□ -0.42
SSRP1-201ENST00000278412 DDX3YO15523 660 aaKnown RBP12.42□□□□□ -0.42
SSRP1-201ENST00000278412 UPP2O95045 317 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 HSPA1AP0DMV8 641 aaKnown RBP12.42□□□□□ -0.42
SSRP1-201ENST00000278412 HSPA1BP0DMV9 641 aaKnown RBP12.42□□□□□ -0.42
SSRP1-201ENST00000278412 GPD2P43304 727 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 POU5F1Q01860 360 aaKnown RBP12.42□□□□□ -0.42
SSRP1-201ENST00000278412 SH3PXD2AQ5TCZ1 1133 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 TRNP1Q6NT89 227 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 PMF1Q6P1K2 205 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 FAM117BQ6P1L5 589 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 ANKS1BQ7Z6G8 1248 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 NT5DC4Q86YG4 428 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 HDAC7Q8WUI4 952 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 MCEEQ96PE7 176 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 AP1M1Q9BXS5 423 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 CRISPLD2Q9H0B8 497 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
SSRP1-201ENST00000278412 A0A0A6YYK5 440 aaPredicted RBP12.41□□□□□ -0.42
SSRP1-201ENST00000278412 TCRBV7S2A1N4TA0A589 114 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 ENPP3O14638 875 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 ZNF623O75123 536 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 GNL1P36915 607 aaPredicted RBP12.41□□□□□ -0.42
SSRP1-201ENST00000278412 TMEM173Q86WV6 379 aaPredicted RBP12.41□□□□□ -0.42
SSRP1-201ENST00000278412 SLC2A14Q8TDB8 520 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 HERPUD2Q9BSE4 406 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 E5RJQ4 531 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 F8VP50 259 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 LRPAP1P30533 357 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 TAS2R40P59535 323 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 RPS6KA1Q15418 735 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 ZDHHC14Q8IZN3 488 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 APPL2Q8NEU8 664 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 RTP3Q9BQQ7 232 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 CYP3A43Q9HB55 503 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 RBM12Q9NTZ6 932 aaKnown RBP12.41□□□□□ -0.42
SSRP1-201ENST00000278412 GIT1Q9Y2X7 761 aa12.41□□□□□ -0.42
SSRP1-201ENST00000278412 TCRBV5S1A1TA0A578 114 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 MYBPHLA2RUH7 354 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 CEP104O60308 925 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 OR4Q2P0C623 313 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 RFC1P35251 1148 aaPredicted RBP12.4□□□□□ -0.42
SSRP1-201ENST00000278412 PLEKHG4Q58EX7 1191 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 SLC24A5Q71RS6 500 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 ZNF677Q86XU0 584 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 PHF13Q86YI8 300 aaPredicted RBP12.4□□□□□ -0.42
SSRP1-201ENST00000278412 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 HES6Q96HZ4 224 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 FAM81BQ96LP2 452 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 PNKPQ96T60 521 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 CRTAC1Q9NQ79 661 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 TBC1D13Q9NVG8 400 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 STAU1O95793 577 aaKnown RBP12.4□□□□□ -0.42
SSRP1-201ENST00000278412 TUBB4AP04350 444 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 COL6A1P12109 1028 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 PDCLQ13371 301 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 PAQR9Q6ZVX9 377 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 RSRC2Q7L4I2 434 aaKnown RBP12.4□□□□□ -0.42
SSRP1-201ENST00000278412 ERICH1Q86X53 443 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 FMNL3Q8IVF7 1028 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 SCUBE3Q8IX30 993 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 MIS12Q9H081 205 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 PRDM5Q9NQX1 630 aaPredicted RBP12.4□□□□□ -0.42
SSRP1-201ENST00000278412 GDAP2Q9NXN4 497 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 PCDHGC3Q9UN70 934 aa12.4□□□□□ -0.42
SSRP1-201ENST00000278412 ZSCAN5CA6NGD5 496 aaPredicted RBP12.39□□□□□ -0.43
SSRP1-201ENST00000278412 HUS1O60921 280 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 PAEPP09466 180 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 P4HA1P13674 534 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 TFE3P19532 575 aaPredicted RBP12.39□□□□□ -0.43
SSRP1-201ENST00000278412 SLC7A5Q01650 507 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 MDH1BQ5I0G3 518 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 FBXO46Q6PJ61 603 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms