RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CACNA1IQ9P0X4 2223 aa15.49■□□□□ 0.07
HMGN3-201ENST00000275036 PATJQ8NI35 1801 aa15.49■□□□□ 0.07
HMGN3-201ENST00000275036 KANSL1LA0AUZ9 987 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 PDXKO00764 312 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 HAPLN1P10915 354 aaPredicted RBP15.48■□□□□ 0.07
HMGN3-201ENST00000275036 RFX1P22670 979 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 GPR15P49685 360 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 MYO1EQ12965 1108 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 INTS6LQ5JSJ4 861 aaKnown RBP15.48■□□□□ 0.07
HMGN3-201ENST00000275036 ASCL5Q7RTU5 278 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 FRMD5Q7Z6J6 570 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 GPIHBP1Q8IV16 184 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 SLC9A9Q8IVB4 645 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
HMGN3-201ENST00000275036 FMR1NBQ8N0W7 255 aaPredicted RBP15.48■□□□□ 0.07
HMGN3-201ENST00000275036 LEMD2Q8NC56 503 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 GOLGA5Q8TBA6 731 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 SPPL2BQ8TCT7 592 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 C2orf15Q8WU43 125 aaKnown RBP15.48■□□□□ 0.07
HMGN3-201ENST00000275036 TMEM174Q8WUU8 243 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 ACBD6Q9BR61 282 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 TRPV4Q9HBA0 871 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 IL21Q9HBE4 155 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 ASB3Q9Y575 518 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 NME7Q9Y5B8 376 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 WDR87Q6ZQQ6 2873 aa15.48■□□□□ 0.07
HMGN3-201ENST00000275036 KIF26AQ9ULI4 1882 aaPredicted RBP15.48■□□□□ 0.07
HMGN3-201ENST00000275036 LRRIQ3A6PVS8 624 aaPredicted RBP15.47■□□□□ 0.07
HMGN3-201ENST00000275036 ARNTLO00327 626 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 NR3C1P04150 777 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 LMO2P25791 158 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 TUFMP49411 452 aaKnown RBP15.47■□□□□ 0.07
HMGN3-201ENST00000275036 CYP4F8P98187 520 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 MYL7Q01449 175 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 TSPY1Q01534 308 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 PFKPQ01813 784 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 PRKCQQ04759 706 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 SMARCB1Q12824 385 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 TPRG1Q6ZUI0 275 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 MAML2Q8IZL2 1156 aaPredicted RBP15.47■□□□□ 0.07
HMGN3-201ENST00000275036 ZNF687Q8N1G0 1237 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 ENGASEQ8NFI3 743 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 SPATA18Q8TC71 538 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 PARD3BQ8TEW8 1205 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 GIPC2Q8TF65 315 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 LRRC3BQ96PB8 259 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 PI4K2AQ9BTU6 479 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 IRF2BPLQ9H1B7 796 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 LTB4R2Q9NPC1 389 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 GTF3C4Q9UKN8 822 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 MAPK8IP1Q9UQF2 711 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 PCDHB5Q9Y5E4 795 aa15.47■□□□□ 0.07
HMGN3-201ENST00000275036 MYH10P35580 1976 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 MYBPHLA2RUH7 354 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 GFRA3O60609 400 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 ATP2C2O75185 946 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.07
HMGN3-201ENST00000275036 PRAMEF12O95522 483 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 PSMC3P17980 439 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 TARSP26639 723 aaKnown RBP15.46■□□□□ 0.07
HMGN3-201ENST00000275036 GABRR2P28476 465 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 LHX1P48742 406 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 MYL6P60660 151 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 DLG4P78352 724 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 CLDN10P78369 228 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 FZD5Q13467 585 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 PNOCQ13519 176 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 KCNB1Q14721 858 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 UBXN2BQ14CS0 331 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 SDHAF4Q5VUM1 108 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.07
HMGN3-201ENST00000275036 DPH6Q7L8W6 267 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 TMEM150AQ86TG1 271 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 ELMO3Q96BJ8 720 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 SHDQ96IW2 340 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 MRPL45Q9BRJ2 306 aaKnown RBP15.46■□□□□ 0.07
HMGN3-201ENST00000275036 TRMT61BQ9BVS5 477 aaKnown RBP15.46■□□□□ 0.07
HMGN3-201ENST00000275036 XYLT2Q9H1B5 865 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 TRAF3IP3Q9Y228 551 aa15.46■□□□□ 0.07
HMGN3-201ENST00000275036 R3HCC1Q9Y3T6 440 aaKnown RBP15.46■□□□□ 0.07
HMGN3-201ENST00000275036 FAM170BA6NMN3 283 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 VNN1O95497 513 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 C4BPAP04003 597 aaKnown RBP15.45■□□□□ 0.06
HMGN3-201ENST00000275036 HMGA1P17096 107 aaKnown RBP15.45■□□□□ 0.06
HMGN3-201ENST00000275036 WARSP23381 471 aaKnown RBP15.45■□□□□ 0.06
HMGN3-201ENST00000275036 CYP2F1P24903 491 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 GDI1P31150 447 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 PSMC1P62191 440 aaKnown RBP15.45■□□□□ 0.06
HMGN3-201ENST00000275036 NFE2Q16621 373 aaPredicted RBP15.45■□□□□ 0.06
HMGN3-201ENST00000275036 C1orf220Q5T0J3 134 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 FAM171BQ6P995 826 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 ITIH5Q86UX2 942 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 SMYD4Q8IYR2 804 aaPredicted RBP15.45■□□□□ 0.06
HMGN3-201ENST00000275036 FAM200AQ8TCP9 573 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 DNASE1L2Q92874 299 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 MMS19Q96T76 1030 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 SYT15Q9BQS2 421 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 ATXN3LQ9H3M9 355 aa15.45■□□□□ 0.06
HMGN3-201ENST00000275036 SLITRK6Q9H5Y7 841 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms