RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 PRMT7Q9NVM4 692 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 SCN3BQ9NY72 215 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 DGKDQ16760 1214 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 PTPROQ16827 1216 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 PCNX4Q63HM2 1172 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 PCSK9Q8NBP7 692 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 MRPS31Q92665 395 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 GABBR1Q9UBS5 961 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 DNMT1P26358 1616 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 MOCS2O96007 188 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 GPS1Q13098 491 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 PID1Q7Z2X4 250 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ZCCHC2Q9C0B9 1178 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 FAM217BQ9NTX9 383 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ZC3H7BQ9UGR2 993 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 MLXQ9UH92 298 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 HAUS5O94927 633 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 CYP2C8P10632 490 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 RBM20Q5T481 1227 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ZCCHC8Q6NZY4 707 aaKnown RBP13.78□□□□□ -0.2
PRDM16-201ENST00000270722 AGBL1Q96MI9 1066 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ING3Q9NXR8 418 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 ERAP1Q9NZ08 941 aa13.78□□□□□ -0.2
PRDM16-201ENST00000270722 PSMD12O00232 456 aaPredicted RBP13.77□□□□□ -0.2
PRDM16-201ENST00000270722 KPNA6O60684 536 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 ADSLP30566 484 aaPredicted RBP13.77□□□□□ -0.2
PRDM16-201ENST00000270722 MAGEA2P43356 314 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 HIRAP54198 1017 aaPredicted RBP13.77□□□□□ -0.2
PRDM16-201ENST00000270722 ZNF827Q17R98 1081 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.2
PRDM16-201ENST00000270722 PPM1NQ8N819 430 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 MINDY2Q8NBR6 621 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 CARD14Q9BXL6 1004 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 EHD1Q9H4M9 534 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 MTMR6Q9Y217 621 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 NR2E3Q9Y5X4 410 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 A0A088AWK7 358 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 ZNF10P21506 573 aaPredicted RBP13.77□□□□□ -0.2
PRDM16-201ENST00000270722 EGFL6Q8IUX8 553 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 DGCR14Q96DF8 476 aaKnown RBP13.77□□□□□ -0.2
PRDM16-201ENST00000270722 RMND5BQ96G75 393 aaPredicted RBP13.77□□□□□ -0.2
PRDM16-201ENST00000270722 C8orf4Q9NR00 106 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 ACADMP11310 421 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 SPP2Q13103 211 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 DNAL1Q4LDG9 190 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 HMG20AQ9NP66 347 aa13.77□□□□□ -0.2
PRDM16-201ENST00000270722 C2orf81A6NN90 581 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 RPS6KA5O75582 802 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 MFN2O95140 757 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ITGA4P13612 1032 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ATP6V1C1P21283 382 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 SCRN1Q12765 414 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ITIH5Q86UX2 942 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CLHC1Q8NHS4 586 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 SPIRE2Q8WWL2 714 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ELMO2Q96JJ3 720 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 METP08581 1390 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 RPN2P04844 631 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 FYNP06241 537 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 S100A12P80511 92 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 SPIRE1Q08AE8 756 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 STAT4Q14765 748 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 GSTA3Q16772 222 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 TDRD10Q5VZ19 366 aaKnown RBP13.77□□□□□ -0.21
PRDM16-201ENST00000270722 FGD2Q7Z6J4 655 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CCDC3Q9BQI4 270 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CIDEBQ9UHD4 219 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 TSC22D2O75157 780 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF157P51786 506 aaPredicted RBP13.77□□□□□ -0.21
PRDM16-201ENST00000270722 RPL10AP62906 217 aaKnown RBP13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CAMK2GQ13555 558 aaPredicted RBP13.77□□□□□ -0.21
PRDM16-201ENST00000270722 PKN2Q16513 984 aaKnown RBP13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CHERPQ8IWX8 916 aaKnown RBP13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CD302Q8IX05 232 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 VMP1Q96GC9 406 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 FAR2Q96K12 515 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ADAMTS1Q9UHI8 967 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 BAIAP2Q9UQB8 552 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ZBTB1Q9Y2K1 713 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CDY2AQ9Y6F7 541 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CDY1Q9Y6F8 540 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 CENPXA8MT69 81 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ABL2P42684 1182 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 EFHC1Q5JVL4 640 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 IL31Q6EBC2 164 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 C1orf50Q9BV19 199 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 ZNRF3Q9ULT6 936 aa13.77□□□□□ -0.21
PRDM16-201ENST00000270722 SOAT2O75908 522 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 ATF4P18848 351 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-201ENST00000270722 LGALS3BPQ08380 585 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 BEND6Q5SZJ8 279 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-201ENST00000270722 RSBN1Q5VWQ0 802 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-201ENST00000270722 CLYBLQ8N0X4 340 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 PPP1R16BQ96T49 567 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 IMPAD1Q9NX62 359 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms