RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ITGA8P53708 1063 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 TAS2R42Q7RTR8 314 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 PPHLN1Q8NEY8 458 aaKnown RBP16.11■□□□□ 0.17
TIMP3-201ENST00000266085 ZBTB45Q96K62 511 aaPredicted RBP16.11■□□□□ 0.17
TIMP3-201ENST00000266085 COLEC11Q9BWP8 271 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 MYO1CO00159 1063 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 MTSS1O43312 755 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 KPNA6O60684 536 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 SNX17Q15036 470 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 HABP4Q5JVS0 413 aaKnown RBP16.11■□□□□ 0.17
TIMP3-201ENST00000266085 SNTG2Q9NY99 539 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 M0QYT0 321 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 STK25O00506 426 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 MAPK7Q13164 816 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 BTNL9Q6UXG8 535 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 ZPBP2Q6X784 338 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 CHSY1Q86X52 802 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 OR2W6PQ8NHA6 318 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 EGFL8Q99944 293 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.11■□□□□ 0.17
TIMP3-201ENST00000266085 PSMC3IPQ9P2W1 217 aaPredicted RBP16.11■□□□□ 0.17
TIMP3-201ENST00000266085 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.11■□□□□ 0.17
TIMP3-201ENST00000266085 KIF3CO14782 793 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 STIP1P31948 543 aaKnown RBP16.1■□□□□ 0.17
TIMP3-201ENST00000266085 RAP1GAPP47736 663 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 PTPN11Q06124 597 aaPredicted RBP16.1■□□□□ 0.17
TIMP3-201ENST00000266085 C10orf120Q5SQS8 335 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 IL31Q6EBC2 164 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 C3orf62Q6ZUJ4 267 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 C1orf186Q6ZWK4 172 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 TTC30AQ86WT1 665 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 DNAAF5Q86Y56 855 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 IL31RAQ8NI17 732 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 ANKRD7Q92527 254 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 CATSPERBQ9H7T0 1116 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 OSGEPQ9NPF4 335 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 PSTPIP1O43586 416 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 ZNF200P98182 395 aaPredicted RBP16.1■□□□□ 0.17
TIMP3-201ENST00000266085 FUT2Q10981 343 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 TMEM132BQ14DG7 1078 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 TTC23LQ6PF05 361 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 GLIS3Q8NEA6 775 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 COPS5Q92905 334 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 SGSM3Q96HU1 749 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 ETNK1Q9HBU6 452 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 INTS13Q9NVM9 706 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 ITGB5P18084 799 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 BFSP2Q13515 415 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 KCNT1Q5JUK3 1230 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 STKLD1Q8NE28 680 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 HASPINQ8TF76 798 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 ORC6Q9Y5N6 252 aa16.1■□□□□ 0.17
TIMP3-201ENST00000266085 ATRNO75882 1429 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 ALDH1A3P47895 512 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 SKIV2LQ15477 1246 aaKnown RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 FBXO47Q5MNV8 452 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 HNRNPLLQ8WVV9 542 aaKnown RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 IL17RAQ96F46 866 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 MTG1Q9BT17 334 aaPredicted RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 TRIM54Q9BYV2 358 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 ALG13Q9NP73 1137 aaKnown RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 NDFIP2Q9NV92 336 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 YDJCA8MPS7 323 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 SERPINB9P50453 376 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 GRAMD1BQ3KR37 738 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 TAF2Q6P1X5 1199 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 ADGRF2Q8IZF7 708 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 KLRG1Q96E93 195 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 ZIM3Q96PE6 472 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 ROPN1BQ9BZX4 212 aaPredicted RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 ROPN1Q9HAT0 212 aaPredicted RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 HACD3Q9P035 362 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 TCP11X1B4DZS4 312 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 TISP43B9A030 160 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 MAP3K7O43318 606 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 TRPA1O75762 1119 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 RPLP2P05387 115 aaKnown RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 MCF2P10911 925 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 PAPD7Q5XG87 772 aaKnown RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 C4orf22Q6V702 233 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 C4orf33Q8N1A6 199 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 FAM71DQ8N9W8 422 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 SOCS4Q8WXH5 440 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 FRMD8Q9BZ67 464 aaPredicted RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 CYP3A43Q9HB55 503 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 XPNPEP3Q9NQH7 507 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 UBIAD1Q9Y5Z9 338 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 MON2Q7Z3U7 1717 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 MAP3K6O95382 1288 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 GHRP10912 638 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 SH3BGRP55822 239 aaPredicted RBP16.09■□□□□ 0.17
TIMP3-201ENST00000266085 WWP1Q9H0M0 922 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 AIPL1Q9NZN9 384 aa16.09■□□□□ 0.17
TIMP3-201ENST00000266085 CYP3A7-CYP3A51PA0A087WV96 503 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 CCDC22O60826 627 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 LGALS2P05162 132 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms