RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 GPD2P43304 727 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 SLC10A6Q3KNW5 377 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 BBS12Q6ZW61 710 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 THNSL1Q8IYQ7 743 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 TRAPPC12Q8WVT3 735 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 MAML1Q92585 1016 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 SEC16BQ96JE7 1060 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 PPCSQ9HAB8 311 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 ANAPC5Q9UJX4 755 aa11.77□□□□□ -0.52
MSH3-201ENST00000265081 A0A1B0GUA9 196 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 NOP56O00567 594 aaKnown RBP11.77□□□□□ -0.53
MSH3-201ENST00000265081 DPYSL4O14531 572 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 IGHA2P01877 340 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 STAG3L1P0CL83 205 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 CETPP11597 493 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 PCK1P35558 622 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 SNX1Q13596 522 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 ATP13A4Q4VNC1 1196 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 JADE1Q6IE81 842 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 MTHFD1LQ6UB35 978 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 TTC39CQ8N584 583 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 CEP120Q8N960 986 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 DHRS4Q9BTZ2 278 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 RPF1Q9H9Y2 349 aaKnown RBP11.77□□□□□ -0.53
MSH3-201ENST00000265081 SHOC2Q9UQ13 582 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.77□□□□□ -0.53
MSH3-201ENST00000265081 TSPAN1O60635 241 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 ERBB2P04626 1255 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 GJB1P08034 283 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 PFKMP08237 780 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 MARK3P27448 753 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 IL1R2P27930 398 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 STAT4Q14765 748 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 ZBTB6Q15916 424 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 ALKAL1Q6UXT8 129 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 TAOK1Q7L7X3 1001 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 ERICH1Q86X53 443 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 GLIS1Q8NBF1 620 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 CCT6BQ92526 530 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 TWNKQ96RR1 684 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 KDM4CQ9H3R0 1056 aa11.77□□□□□ -0.53
MSH3-201ENST00000265081 CLCN3P51790 818 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 SNAPC2Q13487 334 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 IZUMO3Q5VZ72 239 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 ZNF410Q86VK4 478 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 MDM1Q8TC05 714 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 CPXM1Q96SM3 734 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 ASIC3Q9UHC3 531 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 TRIP11Q15643 1979 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 FAM155BO75949 473 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 GH1P01241 217 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 INSRRP14616 1297 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 TSHRP16473 764 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 CYP3A5P20815 502 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 ATP5DP30049 168 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 ACTN3Q08043 901 aaPredicted RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 TRPC3Q13507 836 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 PRCCQ92733 491 aaPredicted RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 TMEM176AQ96HP8 235 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 KIAA1257Q9ULG3 409 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 ALOX15BO15296 676 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 SNAI1O95863 264 aaPredicted RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 RFC1P35251 1148 aaPredicted RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 GRM5P41594 1212 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 PTPN11Q06124 597 aaPredicted RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 GRB14Q14449 540 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 PCBP1Q15365 356 aaKnown RBP eCLIP11.76□□□□□ -0.53
MSH3-201ENST00000265081 LCLAT1Q6UWP7 414 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 MOB2Q70IA6 237 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 PHLDB2Q86SQ0 1253 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 RTP4Q96DX8 246 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 TTC25Q96NG3 672 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 SCLT1Q96NL6 688 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 C11orf84Q9BUA3 381 aaPredicted RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 ADAMTS10Q9H324 1103 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 HMGXB4Q9UGU5 601 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 SMAPO00193 183 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 KRT1P04264 644 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 VDRP11473 427 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 POLR2BP30876 1174 aaKnown RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 RGS9BPQ6ZS82 235 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 EEPD1Q7L9B9 569 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 ARCQ7LC44 396 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 JOSD2Q8TAC2 188 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 HEMGNQ9BXL5 484 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 OSBPL7Q9BZF2 842 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 SMYD3Q9H7B4 428 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 SSU72Q9NP77 194 aaKnown RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 PPANQ9NQ55 473 aaKnown RBP11.76□□□□□ -0.53
MSH3-201ENST00000265081 PNMA3Q9UL41 463 aa11.76□□□□□ -0.53
MSH3-201ENST00000265081 MICAL2O94851 1124 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 KRT7P08729 469 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 ARF4P18085 180 aaPredicted RBP11.75□□□□□ -0.53
MSH3-201ENST00000265081 KDELR1P24390 212 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
MSH3-201ENST00000265081 PACS2Q86VP3 889 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 NAT8LQ8N9F0 302 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 PLEKHA5Q9HAU0 1116 aa11.75□□□□□ -0.53
MSH3-201ENST00000265081 UBN1Q9NPG3 1134 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms