RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CCDC26Q8TAB7 109 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 IFT81Q8WYA0 676 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 ZNF560Q96MR9 790 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 PPP1R10Q96QC0 940 aaKnown RBP16.72■□□□□ 0.27
VPS26A-201ENST00000263559 PADI3Q9ULW8 664 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
VPS26A-201ENST00000263559 TTI1O43156 1089 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 HSPA6P17066 643 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 TNNT3P45378 269 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-201ENST00000263559 TAF6P49848 677 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 TAP1Q03518 808 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 PDCLQ13371 301 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 MAATS1Q7Z4T9 603 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 XYLT1Q86Y38 959 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 RHOT1Q8IXI2 618 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 KRT222Q8N1A0 295 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 GSTCDQ8NEC7 633 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 LPPQ93052 612 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 SYNCQ9H7C4 482 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 GDAP2Q9NXN4 497 aa16.71■□□□□ 0.27
VPS26A-201ENST00000263559 SIGLEC16A6NMB1 481 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 F8VP50 259 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 PSTPIP1O43586 416 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 HCRTO43612 131 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 CABYRO75952 493 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 GHRP10912 638 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 RFC1P35251 1148 aaPredicted RBP16.71■□□□□ 0.26
VPS26A-201ENST00000263559 PNPLA4P41247 253 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 SSR1P43307 286 aaKnown RBP16.71■□□□□ 0.26
VPS26A-201ENST00000263559 HTRA3P83110 453 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 PTK7Q13308 1070 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 ZNF618Q5T7W0 954 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 KBTBD7Q8WVZ9 684 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 PLVAPQ9BX97 442 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 NFU1Q9UMS0 254 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 NOD1Q9Y239 953 aa16.71■□□□□ 0.26
VPS26A-201ENST00000263559 A0A0U1RQG5 324 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-201ENST00000263559 A8MXQ7 604 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 GNRH1P01148 92 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 INHAP05111 366 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 PFKMP08237 780 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 FGFR1P11362 822 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 KRT3P12035 628 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 TCF4P15884 667 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 MLH1P40692 756 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 GABRB2P47870 512 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 AFF1P51825 1210 aaKnown RBP16.7■□□□□ 0.26
VPS26A-201ENST00000263559 ZNF268Q14587 947 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-201ENST00000263559 SIX1Q15475 284 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-201ENST00000263559 PPP2R5EQ16537 467 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 GOLGA7BQ2TAP0 167 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 UNC93AQ86WB7 457 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 GAD1Q99259 594 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 LPIN3Q9BQK8 851 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 DPEP3Q9H4B8 488 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 FAM49BQ9NUQ9 324 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 BHMG1C9JSJ3 638 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-201ENST00000263559 LRPAP1P30533 357 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 EPHB4P54760 987 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
VPS26A-201ENST00000263559 LILRA4P59901 499 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 STILQ15468 1287 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
VPS26A-201ENST00000263559 SV2CQ496J9 727 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 LHX8Q68G74 356 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 JOSD2Q8TAC2 188 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 ST7Q9NRC1 585 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 MIOSQ9NXC5 875 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 WDR35Q9P2L0 1181 aa16.7■□□□□ 0.26
VPS26A-201ENST00000263559 FSCN2O14926 492 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 MGEA5O60502 916 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 PHF2O75151 1096 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 PDGFRBP09619 1106 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 RARAP10276 462 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 LMO2P25791 158 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 GJC1P36383 396 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 PIGHQ14442 188 aaPredicted RBP16.69■□□□□ 0.26
VPS26A-201ENST00000263559 LPIN1Q14693 890 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 IGFBP6P24592 240 aaPredicted RBP16.69■□□□□ 0.26
VPS26A-201ENST00000263559 GNL1P36915 607 aaPredicted RBP16.69■□□□□ 0.26
VPS26A-201ENST00000263559 PAK2Q13177 524 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 ATP13A4Q4VNC1 1196 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 AGMOQ6ZNB7 445 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 SND1Q7KZF4 910 aaKnown RBP eCLIP16.69■□□□□ 0.26
VPS26A-201ENST00000263559 LIMS2Q7Z4I7 341 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 TTC30AQ86WT1 665 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 HACE1Q8IYU2 909 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 APPL2Q8NEU8 664 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 ZNF296Q8WUU4 475 aaPredicted RBP16.69■□□□□ 0.26
VPS26A-201ENST00000263559 MAGOHBQ96A72 148 aaKnown RBP16.69■□□□□ 0.26
VPS26A-201ENST00000263559 ZBTB9Q96C00 473 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 GLT1D1Q96MS3 346 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 HERPUD2Q9BSE4 406 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 METTL5Q9NRN9 209 aaKnown RBP16.69■□□□□ 0.26
VPS26A-201ENST00000263559 CACNG4Q9UBN1 327 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 LCMT1Q9UIC8 334 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 MTUS1Q9ULD2 1270 aa16.69■□□□□ 0.26
VPS26A-201ENST00000263559 CEP350Q5VT06 3117 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 PIK3R2O00459 728 aa16.68■□□□□ 0.26
VPS26A-201ENST00000263559 DR1Q01658 176 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms