RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 C2orf69Q8N8R5 385 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 PARVAQ9NVD7 372 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 DNALI1O14645 258 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 LIASO43766 372 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 PDHA1P08559 390 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 PCK1P35558 622 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 RAD23BP54727 409 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ORC1Q13415 861 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 TFDP1Q14186 410 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 RFX8Q6ZV50 586 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 TAS1R3Q7RTX0 852 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 EXD1Q8NHP7 514 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 USH1CQ9Y6N9 552 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 CCL15-CCL14A0A0B4J2E2 113 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 PSTPIP1O43586 416 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 EXTL3O43909 919 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 LYPLA2O95372 231 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 VNN1O95497 513 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 ASMTLO95671 621 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 ADRA1DP25100 572 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 SNRPFP62306 86 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 CCL15Q16663 113 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 C3orf62Q6ZUJ4 267 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 MTDHQ86UE4 582 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 CDR2LQ86X02 465 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 PALM2Q8IXS6 379 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 RAB3IPQ96QF0 476 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 NUDCD1Q96RS6 583 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 TRIM6Q9C030 488 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 ZMYND8Q9ULU4 1186 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 ENTPD5O75356 428 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 NCOA4Q13772 614 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 TAF1BQ53T94 588 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 CENPUQ71F23 418 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 UTP4Q969X6 686 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 FBXL18Q96ME1 805 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 MAK16Q9BXY0 300 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 CYP26B1Q9NR63 512 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 GINM1Q9NU53 330 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 NXF1Q9UBU9 619 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 PPP2R3BQ9Y5P8 575 aa15.23■□□□□ 0.03
SFSWAP-201ENST00000261674 CFAP69A5D8W1 941 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 DGAT1O75907 488 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 CST3P01034 146 aaPredicted RBP15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 KLRC2P26717 231 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 BASP1P80723 227 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 CRYMQ14894 314 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 BZW1Q7L1Q6 419 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 KATNAL2Q8IYT4 538 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 MCPH1Q8NEM0 835 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 ZC3H15Q8WU90 426 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 IP6K2Q9UHH9 426 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 LGALS13Q9UHV8 139 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 SCINQ9Y6U3 715 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 PMM2O15305 246 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 CYP1A1P04798 512 aaPredicted RBP15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 GCKP35557 465 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 LMNB2Q03252 620 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 HIF1AQ16665 826 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 RNF43Q68DV7 783 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 PPP1R13LQ8WUF5 828 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 GRAMD1AQ96CP6 724 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 SLITRK1Q96PX8 696 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 TIPINQ9BVW5 301 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 TBC1D10AQ9BXI6 508 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 C4BPAP04003 597 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 RCOR2Q8IZ40 523 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 TTC8Q8TAM2 541 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 RSAD2Q8WXG1 361 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 SYNCQ9H7C4 482 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 ZFP69BQ9UJL9 534 aa15.22■□□□□ 0.03
SFSWAP-201ENST00000261674 C19orf81C9J6K1 198 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 PIK3R2O00459 728 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 PSAPP07602 524 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 GARTP22102 1010 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 GCAP28676 217 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 ACTR2P61160 394 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 GPAT2Q6NUI2 795 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 SPOCD1Q6ZMY3 1216 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 ASRGL1Q7L266 308 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 NIPA1Q7RTP0 329 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 EMC1Q8N766 993 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 RBM41Q96IZ5 413 aaKnown RBP15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 JPH1Q9HDC5 661 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 ZNF214Q9UL59 606 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 CST8O60676 142 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 CTCFP49711 727 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 OGDHQ02218 1023 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 CCDC6Q16204 474 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 ANKRD22Q5VYY1 191 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 OTOAQ7RTW8 1153 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 ZNF677Q86XU0 584 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 ACTL9Q8TC94 416 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 ZNF75CPQ92670 426 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 TTC17Q96AE7 1141 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
SFSWAP-201ENST00000261674 C2orf71A6NGG8 1288 aa15.21■□□□□ 0.02
SFSWAP-201ENST00000261674 MAP3K6O95382 1288 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms