RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 SCN11AQ9UI33 1791 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 SNTNA6NMZ2 147 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 RAD51BO15315 384 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 SNAP91O60641 907 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 ADSLP30566 484 aaPredicted RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 RNF220Q5VTB9 566 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 ERI1Q8IV48 349 aaKnown RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 TTC8Q8TAM2 541 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 C1orf54Q8WWF1 131 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 NCLNQ969V3 563 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 ARHGEF26Q96DR7 871 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 PHF20Q9BVI0 1012 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 GTSE1Q9NYZ3 720 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 CLIC5Q9NZA1 410 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 VTI1BQ9UEU0 232 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 CROTQ9UKG9 612 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 PRPF19Q9UMS4 504 aaKnown RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 TYW5A2RUC4 315 aaKnown RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 AIM2O14862 343 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 OTUD4Q01804 1114 aaKnown RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 PDK4Q16654 411 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 CAMK1DQ8IU85 385 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 L3MBTL3Q96JM7 780 aaPredicted RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 EHD4Q9H223 541 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 COG4Q9H9E3 785 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 UBA2Q9UBT2 640 aaPredicted RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 TUBGCP4Q9UGJ1 667 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 BARX2Q9UMQ3 279 aaPredicted RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 MST1RQ04912 1400 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 WEE2P0C1S8 567 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 FASP25445 335 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 HIBADHP31937 336 aaKnown RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 NUDT2P50583 147 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 EZH2Q15910 746 aaKnown RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 MAPK6Q16659 721 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 TIMM50Q3ZCQ8 353 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 PIGWQ7Z7B1 504 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 PROCA1Q8NCQ7 364 aaPredicted RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 SHCBP1Q8NEM2 672 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 GPKOWQ92917 476 aaPredicted RBP eCLIP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 OTULINQ96BN8 352 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 AIFM3Q96NN9 605 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 TLR10Q9BXR5 811 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 CELF4Q9BZC1 486 aaKnown RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 KIAA1683Q9H0B3 1180 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 SMYD2Q9NRG4 433 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 PAK5Q9P286 719 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 CRNNQ9UBG3 495 aaPredicted RBP8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 TPRKBQ9Y3C4 175 aa8.67□□□□□ -1.02
SNCAIP-201ENST00000261367 KIAA0391O15091 583 aaKnown RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 BROXQ5VW32 411 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 PM20D2Q8IYS1 436 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 RDH13Q8NBN7 331 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 MAP3K14Q99558 947 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 ARHGEF10LQ9HCE6 1279 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 APEX2Q9UBZ4 518 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 DSEQ9UL01 958 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 TAF6LQ9Y6J9 622 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 RBM47A0AV96 593 aaKnown RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 COQ9O75208 318 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 LDHAP00338 332 aaKnown RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 PSMA2P25787 234 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 IFNA8P32881 189 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 KRT20P35900 424 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 NAB1Q13506 487 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 LAMC2Q13753 1193 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 SPANXN2Q5MJ10 180 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 C6orf10Q5SRN2 563 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 NIPAL1Q6NVV3 410 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 SCYL2Q6P3W7 929 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 DNAAF3Q8N9W5 541 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 FAM13CQ8NE31 585 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 CCDC126Q96EE4 140 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 RBBP8Q99708 897 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 ILKAPQ9H0C8 392 aaPredicted RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 THAP1Q9NVV9 213 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 SHOC2Q9UQ13 582 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 NAALADL1Q9UQQ1 740 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 ALG6Q9Y672 507 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 PNPLA7Q6ZV29 1317 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 hCG_1642624A0A1W2PR95 340 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 LRRIQ4A6NIV6 560 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 GJB6O95452 261 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 RARAP10276 462 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 COPB2P35606 906 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 GALK1P51570 392 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 CASP5P51878 434 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 AP3M2P53677 418 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 RAD23AP54725 363 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 TP53BP2Q13625 1128 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 CAPRIN1Q14444 709 aaKnown RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 FOXR2Q6PJQ5 311 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 C4orf50Q6ZRC1 276 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 ANKRD23Q86SG2 305 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 TMA16Q96EY4 203 aaKnown RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 APOPT1Q96IL0 206 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 EYA3Q99504 573 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms