RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 GADL1Q6ZQY3 521 aa19.39■□□□□ 0.7
LRP3-201ENST00000253193 ANKS1BQ7Z6G8 1248 aa19.39■□□□□ 0.7
LRP3-201ENST00000253193 SLCO2A1Q92959 643 aa19.39■□□□□ 0.7
LRP3-201ENST00000253193 VCPIP1Q96JH7 1222 aa19.39■□□□□ 0.7
LRP3-201ENST00000253193 SCN9AQ15858 1988 aa19.39■□□□□ 0.7
LRP3-201ENST00000253193 TAF1LQ8IZX4 1826 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 RFC1P35251 1148 aaPredicted RBP19.39■□□□□ 0.69
LRP3-201ENST00000253193 KRT81Q14533 505 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 MTFR1Q15390 333 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 SGSM1Q2NKQ1 1148 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 PPP1R2P3Q6NXS1 205 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 PHF13Q86YI8 300 aaPredicted RBP19.39■□□□□ 0.69
LRP3-201ENST00000253193 FAM167BQ9BTA0 163 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 USH1CQ9Y6N9 552 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 HIRAP54198 1017 aaPredicted RBP19.39■□□□□ 0.69
LRP3-201ENST00000253193 EIF3EP60228 445 aaKnown RBP19.39■□□□□ 0.69
LRP3-201ENST00000253193 SP2Q02086 613 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 C1orf228Q6PIY5 440 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 ATP11CQ8NB49 1132 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 MYLK2Q9H1R3 596 aa19.39■□□□□ 0.69
LRP3-201ENST00000253193 RGS20O76081 388 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 MMP8P22894 467 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 RXRBP28702 533 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 TCF7P36402 384 aaPredicted RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 RASSF2P50749 326 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 TTLL12Q14166 644 aaPredicted RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 SCARA3Q6AZY7 606 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 OR6B2Q6IFH4 312 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 METTL5Q9NRN9 209 aaKnown RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 DDX56Q9NY93 547 aaKnown RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 XPO7Q9UIA9 1087 aaKnown RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 ZFP69BQ9UJL9 534 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 WDR4P57081 412 aaKnown RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 DALRD3Q5D0E6 543 aaKnown RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.38■□□□□ 0.69
LRP3-201ENST00000253193 ECHDC2Q86YB7 292 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 VPS52Q8N1B4 723 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 FBXO36Q8NEA4 188 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 MAGEC3Q8TD91 643 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 MCUR1Q96AQ8 359 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 FAXDC2Q96IV6 333 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 CCDC134Q9H6E4 229 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 POLIQ9UNA4 740 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 SMG5Q9UPR3 1016 aaKnown RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 MAD1L1Q9Y6D9 718 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 ATAD5Q96QE3 1844 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 CFAP69A5D8W1 941 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 TMEM191CA6NGB0 347 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 DCTN3O75935 186 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 RBP3P10745 1247 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 ACO1P21399 889 aaKnown RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 EFTUD2Q15029 972 aaKnown RBP eCLIP19.38■□□□□ 0.692e-8■■■■■ 31.4
LRP3-201ENST00000253193 FAM102AQ5T9C2 384 aaPredicted RBP19.38■□□□□ 0.69
LRP3-201ENST00000253193 PPP1R14CQ8TAE6 165 aa19.38■□□□□ 0.69
LRP3-201ENST00000253193 M0QYV0 167 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 ZBTB7AO95365 584 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 CBX6O95503 412 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 KRT7P08729 469 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 ERFP50548 548 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 RNASELQ05823 741 aaKnown RBP19.37■□□□□ 0.69
LRP3-201ENST00000253193 MORF4L2Q15014 288 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 TRABD2AQ86V40 505 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 NGRNQ9NPE2 291 aaKnown RBP19.37■□□□□ 0.69
LRP3-201ENST00000253193 A0A0B4J269 797 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 GJB1P08034 283 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 PTPRAP18433 802 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 YWHAEP62258 255 aaKnown RBP19.37■□□□□ 0.69
LRP3-201ENST00000253193 FSTL1Q12841 308 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 CAPSQ13938 189 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 ALLCQ8N6M5 410 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 UBA3Q8TBC4 463 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 SPATA18Q8TC71 538 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 ADPGKQ9BRR6 497 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 RPF1Q9H9Y2 349 aaKnown RBP19.37■□□□□ 0.69
LRP3-201ENST00000253193 CDH6P55285 790 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 GEMIN4P57678 1058 aaKnown RBP19.37■□□□□ 0.69
LRP3-201ENST00000253193 SMAD1Q15797 465 aaKnown RBP19.37■□□□□ 0.69
LRP3-201ENST00000253193 RIBC1Q8N443 379 aaPredicted RBP19.37■□□□□ 0.69
LRP3-201ENST00000253193 TRAPPC12Q8WVT3 735 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 FAF2Q96CS3 445 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 ZNF570Q96NI8 536 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 FOXP3Q9BZS1 431 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 STRIP2Q9ULQ0 834 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 C15orf41Q9Y2V0 281 aa19.37■□□□□ 0.69
LRP3-201ENST00000253193 SLX4Q8IY92 1834 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.36■□□□□ 0.69
LRP3-201ENST00000253193 TTLL13PA6NNM8 815 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 F5H423 210 aaPredicted RBP19.36■□□□□ 0.69
LRP3-201ENST00000253193 TOM1L1O75674 476 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 KLF1Q13351 362 aaPredicted RBP19.36■□□□□ 0.69
LRP3-201ENST00000253193 TAF11Q15544 211 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 CRELD2Q6UXH1 353 aaPredicted RBP19.36■□□□□ 0.69
LRP3-201ENST00000253193 CEP120Q8N960 986 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.36■□□□□ 0.69
LRP3-201ENST00000253193 KIF1CO43896 1103 aaKnown RBP19.36■□□□□ 0.69
LRP3-201ENST00000253193 ADRA1DP25100 572 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 GCLCP48506 637 aaPredicted RBP19.36■□□□□ 0.69
LRP3-201ENST00000253193 GAD2Q05329 585 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 BNIP1Q12981 228 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 LY6KQ17RY6 165 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms