RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SYT15Q9BQS2 421 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 PLA2G2FQ9BZM2 168 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 SLC2A4RGQ9NR83 387 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 NXF1Q9UBU9 619 aaKnown RBP24.58■■□□□ 1.53
LSM4-201ENST00000252816 WNT16Q9UBV4 365 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 MUC6Q6W4X9 2439 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 KRBA1A5PL33 1030 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 TACC1O75410 805 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 PDGFRBP09619 1106 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 CYP2F1P24903 491 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 RPL13P26373 211 aaKnown RBP24.57■■□□□ 1.52
LSM4-201ENST00000252816 TNNC1P63316 161 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 ADAM9Q13443 819 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 ZACNQ401N2 412 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 IER5LQ5T953 404 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 ELOA2Q8IYF1 753 aaPredicted RBP24.57■■□□□ 1.52
LSM4-201ENST00000252816 SIX5Q8N196 739 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 EEF2KMTQ96G04 330 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 ASB16Q96NS5 453 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 VRTNQ9H8Y1 702 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 ABCB6Q9NP58 842 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 CRTAC1Q9NQ79 661 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 HOOK1Q9UJC3 728 aaKnown RBP24.57■■□□□ 1.52
LSM4-201ENST00000252816 CDH9Q9ULB4 789 aa24.57■■□□□ 1.52
LSM4-201ENST00000252816 IKBKBO14920 756 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 KINO60870 393 aaKnown RBP24.56■■□□□ 1.52
LSM4-201ENST00000252816 ECI2O75521 394 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 NPR3P17342 541 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 AVPR2P30518 371 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 VAMP7P51809 220 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 VEPH1Q14D04 833 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 EDRF1Q3B7T1 1238 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 COBLL1Q53SF7 1204 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 STXBP5Q5T5C0 1151 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 SDHAF4Q5VUM1 108 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 SV2AQ7L0J3 742 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 FAM186BQ8IYM0 893 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 STKLD1Q8NE28 680 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 IL21Q9HBE4 155 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 CA14Q9ULX7 337 aa24.56■■□□□ 1.52
LSM4-201ENST00000252816 FAM163BP0C2L3 166 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 TRIM49P0CI25 452 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 TRIM49CP0CI26 452 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 GABRR2P28476 465 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 PSMC2P35998 433 aaKnown RBP24.55■■□□□ 1.52
LSM4-201ENST00000252816 GNL1P36915 607 aaPredicted RBP24.55■■□□□ 1.52
LSM4-201ENST00000252816 ANP32AP39687 249 aaKnown RBP24.55■■□□□ 1.52
LSM4-201ENST00000252816 ZNF699Q32M78 642 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 CFAP221Q4G0U5 840 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 CWF19L1Q69YN2 538 aaKnown RBP24.55■■□□□ 1.52
LSM4-201ENST00000252816 INTS8Q75QN2 995 aaKnown RBP24.55■■□□□ 1.52
LSM4-201ENST00000252816 SPATA2LQ8IUW3 424 aaPredicted RBP24.55■■□□□ 1.52
LSM4-201ENST00000252816 SMARCD2Q92925 531 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 ELSPBP1Q96BH3 223 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 SNX25Q9H3E2 840 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 MFSD1Q9H3U5 465 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 SMYD3Q9H7B4 428 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 MAN1B1Q9UKM7 699 aa24.55■■□□□ 1.52
LSM4-201ENST00000252816 KMT2EQ8IZD2 1858 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 HMGA1P17096 107 aaKnown RBP24.54■■□□□ 1.52
LSM4-201ENST00000252816 PMS1P54277 932 aaKnown RBP24.54■■□□□ 1.52
LSM4-201ENST00000252816 CDH8P55286 799 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 PPP3CAQ08209 521 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 DDR2Q16832 855 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 ISM2Q6H9L7 571 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 ADSSL1Q8N142 457 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 OR6B3Q8NGW1 331 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 ZSCAN18Q8TBC5 510 aaPredicted RBP24.54■■□□□ 1.52
LSM4-201ENST00000252816 MYLPFQ96A32 169 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 FUBP3Q96I24 572 aaKnown RBP eCLIP24.54■■□□□ 1.52
LSM4-201ENST00000252816 MKNK1Q9BUB5 465 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 ATXN3LQ9H3M9 355 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 SLITRK6Q9H5Y7 841 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 ZFP14Q9HCL3 533 aa24.54■■□□□ 1.52
LSM4-201ENST00000252816 ARIH1Q9Y4X5 557 aaPredicted RBP24.54■■□□□ 1.52
LSM4-201ENST00000252816 VIPR2P41587 438 aa24.53■■□□□ 1.52
LSM4-201ENST00000252816 ZNF667Q5HYK9 610 aa24.53■■□□□ 1.52
LSM4-201ENST00000252816 ASTLQ6HA08 431 aaPredicted RBP24.53■■□□□ 1.52
LSM4-201ENST00000252816 TMEM105Q8N8V8 129 aa24.53■■□□□ 1.52
LSM4-201ENST00000252816 FLCNQ8NFG4 579 aa24.53■■□□□ 1.52
LSM4-201ENST00000252816 SDCBP2Q9H190 292 aa24.53■■□□□ 1.52
LSM4-201ENST00000252816 DPEP3Q9H4B8 488 aa24.53■■□□□ 1.52
LSM4-201ENST00000252816 NCANO14594 1321 aa24.53■■□□□ 1.52
LSM4-201ENST00000252816 FGF19O95750 216 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 HLA-DRAP01903 254 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 KRT13P13646 458 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 RAP1GAPP47736 663 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 GCLMP48507 274 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 MCCD1P59942 119 aaPredicted RBP24.52■■□□□ 1.52
LSM4-201ENST00000252816 RPL10AP62906 217 aaKnown RBP24.52■■□□□ 1.52
LSM4-201ENST00000252816 ENPEPQ07075 957 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 TAF12Q16514 161 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 SGSM1Q2NKQ1 1148 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 ANKRD40Q6AI12 368 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 SCARA5Q6ZMJ2 495 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 C4orf50Q6ZRC1 276 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 TMEM150AQ86TG1 271 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 MYCBPAPQ8TBZ2 947 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 PCED1BQ96HM7 432 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 GPR88Q9GZN0 384 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms